RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 SMIM10L2BP0DMW5 78 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 HOXD8P13378 290 aaPredicted RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 GRK4P32298 578 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 MTIF2P46199 727 aaKnown RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 GJA9P57773 515 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 LRRC63Q05C16 580 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 CCDC173Q0VFZ6 552 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 ADAM9Q13443 819 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 BMT2Q1RMZ1 405 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 CCDC40Q4G0X9 1142 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 IER5Q5VY09 327 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 SARM1Q6SZW1 724 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 MTHFD1LQ6UB35 978 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 IRF2BP1Q8IU81 584 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 TMEM161BQ8NDZ6 487 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 TCP11Q8WWU5 503 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 PSPC1Q8WXF1 523 aaKnown RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 BICD1Q96G01 975 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 CNOT6LQ96LI5 555 aaKnown RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 NLRP4Q96MN2 994 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 PCIF1Q9H4Z3 704 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 TYW1Q9NV66 732 aaKnown RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 WBP1LQ9NX94 342 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 AKT3Q9Y243 479 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 ADGRA3Q8IWK6 1321 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 TGFB1I1O43294 461 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 FGFR1OPO95684 399 aaKnown RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 F2P00734 622 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 NR3C1P04150 777 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 MAPTP10636 758 aaKnown RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 NR2F2P24468 414 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 DNM2P50570 870 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 CYP2J2P51589 502 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 ZNF200P98182 395 aaPredicted RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 PURAQ00577 322 aaKnown RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 LAMTOR4Q0VGL1 99 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 CAPSQ13938 189 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 KRT31Q15323 416 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 ZCWPW2Q504Y3 356 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 CEP135Q66GS9 1140 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 CXCL17Q6UXB2 119 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 EXOC8Q8IYI6 725 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 SLAIN1Q8ND83 568 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 ANKRD20A12PQ8NF67 263 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 PXYLP1Q8TE99 480 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 SPIRE2Q8WWL2 714 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 JPH2Q9BR39 696 aaPredicted RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 FAM49AQ9H0Q0 323 aaPredicted RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 DDX20Q9UHI6 824 aaKnown RBP12.51□□□□□ -0.41
XRCC4-201ENST00000282268 TBX20Q9UMR3 447 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 PPME1Q9Y570 386 aa12.51□□□□□ -0.41
XRCC4-201ENST00000282268 PDXKO00764 312 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 CETN3O15182 167 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 CBFA2T2O43439 604 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 ZEB2O60315 1214 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 PPP1R37O75864 691 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 VTNP04004 478 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 PRKCSHP14314 528 aaPredicted RBP12.5□□□□□ -0.41
XRCC4-201ENST00000282268 NAMPTP43490 491 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 RTP1P59025 263 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 FKBP3Q00688 224 aaKnown RBP12.5□□□□□ -0.41
XRCC4-201ENST00000282268 PPP2R5AQ15172 486 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 KCNA10Q16322 511 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 LRRC55Q6ZSA7 311 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 HS2ST1Q7LGA3 356 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 FAM114A1Q8IWE2 563 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 RNF149Q8NC42 400 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 VTI1AQ96AJ9 217 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 STRA6Q9BX79 667 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 GBP3Q9H0R5 595 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 C17orf75Q9HAS0 396 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 UBE4BO95155 1302 aa12.5□□□□□ -0.41
XRCC4-201ENST00000282268 IGKV6-21A0A0C4DH24 114 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 N4BP3O15049 544 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 MAGEB2O15479 319 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 COPB1P53618 953 aaKnown RBP12.49□□□□□ -0.41
XRCC4-201ENST00000282268 PRMT2P55345 433 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 GTF2BQ00403 316 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 SPAG1Q07617 926 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 TMEM62Q0P6H9 643 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 STRN3Q13033 797 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 ALCAMQ13740 583 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 FILIP1LQ4L180 1135 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 FAM47CQ5HY64 1035 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 MARCH8Q5T0T0 291 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 NFRKBQ6P4R8 1299 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 TMC6Q7Z403 805 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 C7orf31Q8N865 590 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 RDH13Q8NBN7 331 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 SLC17A8Q8NDX2 589 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 LMBR1Q8WVP7 490 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 SCLT1Q96NL6 688 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 MTG1Q9BT17 334 aaPredicted RBP12.49□□□□□ -0.41
XRCC4-201ENST00000282268 KATNAL1Q9BW62 490 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 UPF3AQ9H1J1 476 aaKnown RBP12.49□□□□□ -0.41
XRCC4-201ENST00000282268 TMEM206Q9H813 350 aa12.49□□□□□ -0.41
XRCC4-201ENST00000282268 HMX1Q9NP08 348 aaPredicted RBP12.49□□□□□ -0.41
XRCC4-201ENST00000282268 AGPAT3Q9NRZ7 376 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms