RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 A0A1W2PQC6 194 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 DGAT1O75907 488 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 CTDNEP1O95476 244 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 GTF2A1P52655 376 aaPredicted RBP12.09□□□□□ -0.47
USP6NL-201ENST00000277575 ADCY1Q08828 1119 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 ZNF746Q6NUN9 644 aaPredicted RBP12.09□□□□□ -0.47
USP6NL-201ENST00000277575 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 FBXL13Q8NEE6 735 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 PCK1P35558 622 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 EFNA5P52803 228 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 DHX40Q8IX18 779 aaKnown RBP12.09□□□□□ -0.47
USP6NL-201ENST00000277575 RYBPQ8N488 228 aaPredicted RBP12.09□□□□□ -0.47
USP6NL-201ENST00000277575 RSRC1Q96IZ7 334 aaKnown RBP12.09□□□□□ -0.47
USP6NL-201ENST00000277575 POLLQ9UGP5 575 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 ADGRG1Q9Y653 693 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 SIGLEC1Q9BZZ2 1709 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 SMARCA1P28370 1054 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 MSH2P43246 934 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 SLCO1A2P46721 670 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 IL9RQ01113 521 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 RAPH1Q70E73 1250 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 COL23A1Q86Y22 540 aaPredicted RBP12.09□□□□□ -0.47
USP6NL-201ENST00000277575 AGBL3Q8NEM8 1001 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 SMYD2Q9NRG4 433 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 BAIAP2L1Q9UHR4 511 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 MAGED2Q9UNF1 606 aaPredicted RBP12.09□□□□□ -0.47
USP6NL-201ENST00000277575 ANO9A1A5B4 782 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 RPS12P25398 132 aaKnown RBP12.09□□□□□ -0.47
USP6NL-201ENST00000277575 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
USP6NL-201ENST00000277575 DUOXA2Q1HG44 320 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 GPD1LQ8N335 351 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 WHAMMQ8TF30 809 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 SKA2Q8WVK7 121 aaPredicted RBP12.09□□□□□ -0.47
USP6NL-201ENST00000277575 EDEM3Q9BZQ6 932 aa12.09□□□□□ -0.47
USP6NL-201ENST00000277575 KIAA1210Q9ULL0 1709 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 CALB1P05937 261 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 STK4Q13043 487 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 TFDP2Q14188 446 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 TTC19Q6DKK2 380 aaPredicted RBP12.08□□□□□ -0.48
USP6NL-201ENST00000277575 BZW1Q7L1Q6 419 aaKnown RBP12.08□□□□□ -0.48
USP6NL-201ENST00000277575 FRMD5Q7Z6J6 570 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 TXNRD3Q86VQ6 643 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 ADSSL1Q8N142 457 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 RNF10Q8N5U6 811 aaKnown RBP12.08□□□□□ -0.48
USP6NL-201ENST00000277575 SEPT1Q8WYJ6 367 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 HSPH1Q92598 858 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 CFAP57Q96MR6 1250 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 TMEM60Q9H2L4 133 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 HPS5Q9UPZ3 1129 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 PREX1Q8TCU6 1659 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 TJP3O95049 919 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 FTLP02792 175 aaPredicted RBP12.08□□□□□ -0.48
USP6NL-201ENST00000277575 TAF1CQ15572 869 aaPredicted RBP12.08□□□□□ -0.48
USP6NL-201ENST00000277575 MFSD14CQ5VZR4 134 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 GLYCTKQ8IVS8 523 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 NCAPGQ9BPX3 1015 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 HEMGNQ9BXL5 484 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 EFCC1Q9HA90 598 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 STRIP2Q9ULQ0 834 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 UBE4BO95155 1302 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 NPHP3-ACAD11A0A0J9YXS1 232 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 GOLGA8CPA6NN73 597 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 HOXD10P28358 340 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 NFIAQ12857 509 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 SCN4BQ8IWT1 228 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 THEM5Q8N1Q8 247 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 RBM41Q96IZ5 413 aaKnown RBP12.08□□□□□ -0.48
USP6NL-201ENST00000277575 DCCP43146 1447 aa12.08□□□□□ -0.48
USP6NL-201ENST00000277575 SRGAP2O75044 1071 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 PDLIM2Q96JY6 352 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 PRMT6Q96LA8 375 aaPredicted RBP12.07□□□□□ -0.48
USP6NL-201ENST00000277575 C7orf25Q9BPX7 421 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 HACL1Q9UJ83 578 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 STK38LQ9Y2H1 464 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 SYNGAP1Q96PV0 1343 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 ESYT2A0FGR8 921 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 MYMKA6NI61 221 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 RASGRF2O14827 1237 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 GPC4O75487 556 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 RHOBTB3O94955 611 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 SLC4A1P02730 911 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 GNA15P30679 374 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 CLCN6P51797 869 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 TKFCQ3LXA3 575 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 SPATA31D1Q6ZQQ2 1576 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 ENOSF1Q7L5Y1 443 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 MCUQ8NE86 351 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 FAM217BQ9NTX9 383 aaPredicted RBP12.07□□□□□ -0.48
USP6NL-201ENST00000277575 DNAJC17Q9NVM6 304 aaKnown RBP12.07□□□□□ -0.48
USP6NL-201ENST00000277575 TBK1Q9UHD2 729 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 NFU1Q9UMS0 254 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 FNDC3AQ9Y2H6 1198 aaKnown RBP12.07□□□□□ -0.48
USP6NL-201ENST00000277575 EXOC1LA0A1B0GW35 172 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 CTNND1O60716 968 aaKnown RBP12.07□□□□□ -0.48
USP6NL-201ENST00000277575 FGFR2P21802 821 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 TMED2Q15363 201 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 DPF2Q92785 391 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 REEP2Q9BRK0 252 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 FAN1Q9Y2M0 1017 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 SNX24Q9Y343 169 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms