RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 BMP2KQ9NSY1 1161 aaPredicted RBP16.14■□□□□ 0.17
HMGN3-201ENST00000275036 TMEM161AQ9NX61 479 aa16.14■□□□□ 0.17
HMGN3-201ENST00000275036 H3BQ06 376 aaPredicted RBP16.13■□□□□ 0.17
HMGN3-201ENST00000275036 LTBRP36941 435 aa16.13■□□□□ 0.17
HMGN3-201ENST00000275036 DNM2P50570 870 aa16.13■□□□□ 0.17
HMGN3-201ENST00000275036 HYAL1Q12794 435 aa16.13■□□□□ 0.17
HMGN3-201ENST00000275036 LRRC55Q6ZSA7 311 aa16.13■□□□□ 0.17
HMGN3-201ENST00000275036 FAM43BQ6ZT52 329 aaPredicted RBP16.13■□□□□ 0.17
HMGN3-201ENST00000275036 RHPN2Q8IUC4 686 aa16.13■□□□□ 0.17
HMGN3-201ENST00000275036 SCLT1Q96NL6 688 aa16.13■□□□□ 0.17
HMGN3-201ENST00000275036 LMAN2LQ9H0V9 348 aa16.13■□□□□ 0.17
HMGN3-201ENST00000275036 CWH43Q9H720 699 aa16.13■□□□□ 0.17
HMGN3-201ENST00000275036 CD320Q9NPF0 282 aa16.13■□□□□ 0.17
HMGN3-201ENST00000275036 PCDHGC5Q9Y5F6 944 aa16.13■□□□□ 0.17
HMGN3-201ENST00000275036 A0A087WWV3 80 aa16.12■□□□□ 0.17
HMGN3-201ENST00000275036 LINC01565O15544 149 aa16.12■□□□□ 0.17
HMGN3-201ENST00000275036 LYPLA2O95372 231 aa16.12■□□□□ 0.17
HMGN3-201ENST00000275036 IL9P15248 144 aa16.12■□□□□ 0.17
HMGN3-201ENST00000275036 ATF7P17544 494 aaPredicted RBP16.12■□□□□ 0.17
HMGN3-201ENST00000275036 U2AF2P26368 475 aaKnown RBP eCLIP16.12■□□□□ 0.172e-11■■■■■ 34.4
HMGN3-201ENST00000275036 TOB1P50616 345 aaPredicted RBP16.12■□□□□ 0.17
HMGN3-201ENST00000275036 POLGP54098 1239 aaPredicted RBP16.12■□□□□ 0.17
HMGN3-201ENST00000275036 DLX2Q07687 328 aaPredicted RBP16.12■□□□□ 0.17
HMGN3-201ENST00000275036 XKR9Q5GH70 373 aa16.12■□□□□ 0.17
HMGN3-201ENST00000275036 TTC38Q5R3I4 469 aa16.12■□□□□ 0.17
HMGN3-201ENST00000275036 ADGRD2Q7Z7M1 963 aa16.12■□□□□ 0.17
HMGN3-201ENST00000275036 KHSRPQ92945 711 aaKnown RBP eCLIP16.12■□□□□ 0.172e-8■□□□□ 9.3
HMGN3-201ENST00000275036 TMEM143Q96AN5 459 aa16.12■□□□□ 0.17
HMGN3-201ENST00000275036 PABPC5Q96DU9 382 aaKnown RBP16.12■□□□□ 0.17
HMGN3-201ENST00000275036 CASD1Q96PB1 797 aa16.12■□□□□ 0.17
HMGN3-201ENST00000275036 GCOM2Q9BZD3 368 aaPredicted RBP16.12■□□□□ 0.17
HMGN3-201ENST00000275036 ELAC1Q9H777 363 aaKnown RBP16.12■□□□□ 0.17
HMGN3-201ENST00000275036 IFT122Q9HBG6 1241 aa16.12■□□□□ 0.17
HMGN3-201ENST00000275036 XPNPEP1Q9NQW7 623 aa16.12■□□□□ 0.17
HMGN3-201ENST00000275036 TYW1Q9NV66 732 aaKnown RBP16.12■□□□□ 0.17
HMGN3-201ENST00000275036 OR52Z1P0C646 297 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 SPATA31C1P0DKV0 1188 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 RFC5P40937 340 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 CDC42EP1Q00587 391 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 EMC2Q15006 297 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 CTC1Q2NKJ3 1217 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 CLLU1OSQ5K130 101 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 OTUD6AQ7L8S5 288 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 ZNF598Q86UK7 904 aaKnown RBP16.11■□□□□ 0.17
HMGN3-201ENST00000275036 ZNF410Q86VK4 478 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 ECHDC2Q86YB7 292 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 C4orf32Q8N8J7 132 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 POF1BQ8WVV4 589 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 PRPF31Q8WWY3 499 aaKnown RBP16.11■□□□□ 0.17
HMGN3-201ENST00000275036 SLC7A3Q8WY07 619 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 NLRP4Q96MN2 994 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 JPH2Q9BR39 696 aaPredicted RBP16.11■□□□□ 0.17
HMGN3-201ENST00000275036 ATP6V0A4Q9HBG4 840 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 PPME1Q9Y570 386 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 COL4A3BPQ9Y5P4 624 aa16.11■□□□□ 0.17
HMGN3-201ENST00000275036 TBX10O75333 385 aa16.1■□□□□ 0.17
HMGN3-201ENST00000275036 MED24O75448 989 aa16.1■□□□□ 0.17
HMGN3-201ENST00000275036 ZSCAN20P17040 1043 aaPredicted RBP16.1■□□□□ 0.17
HMGN3-201ENST00000275036 PBX3P40426 434 aa16.1■□□□□ 0.17
HMGN3-201ENST00000275036 TECP42680 631 aa16.1■□□□□ 0.17
HMGN3-201ENST00000275036 ORC2Q13416 577 aaPredicted RBP16.1■□□□□ 0.17
HMGN3-201ENST00000275036 GNL2Q13823 731 aaKnown RBP16.1■□□□□ 0.17
HMGN3-201ENST00000275036 NAALADL2Q58DX5 795 aa16.1■□□□□ 0.17
HMGN3-201ENST00000275036 COLGALT1Q8NBJ5 622 aa16.1■□□□□ 0.17
HMGN3-201ENST00000275036 PIGOQ8TEQ8 1089 aa16.1■□□□□ 0.17
HMGN3-201ENST00000275036 MINDY3Q9H8M7 445 aa16.1■□□□□ 0.17
HMGN3-201ENST00000275036 CLDND1Q9NY35 253 aa16.1■□□□□ 0.17
HMGN3-201ENST00000275036 A0A0U1RQF3 1178 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 GRXCR2A6NFK2 248 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 GJB2P29033 226 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 TRAPPC10P48553 1259 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 RARRES1P49788 294 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 LAMTOR4Q0VGL1 99 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 PTCRAQ6ISU1 281 aaPredicted RBP16.09■□□□□ 0.17
HMGN3-201ENST00000275036 EP400NLQ6ZTU2 488 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 CATSPER3Q86XQ3 398 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 RNF169Q8NCN4 708 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 PSPC1Q8WXF1 523 aaKnown RBP16.09■□□□□ 0.17
HMGN3-201ENST00000275036 TMEM117Q9H0C3 514 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 ANKEF1Q9NU02 776 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 PCDHB6Q9Y5E3 794 aa16.09■□□□□ 0.17
HMGN3-201ENST00000275036 MEIS3P2A8K0S8 358 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 FGF18O76093 207 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 SRGAP2CP0DJJ0 459 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 SFPQP23246 707 aaKnown RBP eCLIP16.08■□□□□ 0.16
HMGN3-201ENST00000275036 MCM2P49736 904 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 CLUL1Q15846 466 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 SPOUT1Q5T280 376 aaKnown RBP16.08■□□□□ 0.16
HMGN3-201ENST00000275036 FERMT3Q86UX7 667 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 FAM178BQ8IXR5 827 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 EXOC8Q8IYI6 725 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 HELQQ8TDG4 1101 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 MTRQ99707 1265 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 BACH2Q9BYV9 841 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 IGFLR1Q9H665 355 aa16.08■□□□□ 0.16
HMGN3-201ENST00000275036 NOL7Q9UMY1 257 aaKnown RBP16.08■□□□□ 0.16
HMGN3-201ENST00000275036 GAS2O43903 313 aaKnown RBP16.07■□□□□ 0.16
HMGN3-201ENST00000275036 GLP2RO95838 553 aa16.07■□□□□ 0.16
HMGN3-201ENST00000275036 PHKA2P46019 1235 aa16.07■□□□□ 0.16
HMGN3-201ENST00000275036 ERVFC1P60507 584 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms