RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 TUBB3Q13509 450 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 TRIM16LQ309B1 348 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 TTC30AQ86WT1 665 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 LRRC47Q8N1G4 583 aaKnown RBP14.08□□□□□ -0.15
PRDM16-201ENST00000270722 NCLNQ969V3 563 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 THAP11Q96EK4 314 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 USP28Q96RU2 1077 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 RHBDL2Q9NX52 303 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 KRT1P04264 644 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 PDHA1P08559 390 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 RALBP11234 206 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 NCKAP1LP55160 1127 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 POLR2FP61218 127 aaKnown RBP14.08□□□□□ -0.16
PRDM16-201ENST00000270722 MAPK6Q16659 721 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 RUNDC3AQ59EK9 446 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 ALS2CLQ60I27 953 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 CARD8Q9Y2G2 431 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 ATP10AO60312 1499 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 ACAD11Q709F0 780 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 NT5DC4Q86YG4 428 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 CRLF3Q8IUI8 442 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 MB21D1Q8N884 522 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 CDC26Q8NHZ8 85 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 DEPDC1BQ8WUY9 529 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 TTC17Q96AE7 1141 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 PLEKHG2Q9H7P9 1386 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 DISP3Q9P2K9 1392 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 MLH1P40692 756 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 DENND6AQ8IWF6 608 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 HEXIM2Q96MH2 286 aaKnown RBP14.08□□□□□ -0.16
PRDM16-201ENST00000270722 ZFP42Q96MM3 310 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 AP3B2Q13367 1082 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 ORC2Q13416 577 aaPredicted RBP14.08□□□□□ -0.16
PRDM16-201ENST00000270722 OLFML2BQ68BL8 750 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 B3GALT6Q96L58 329 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 KLC4Q9NSK0 619 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 NPM3O75607 178 aaKnown RBP14.08□□□□□ -0.16
PRDM16-201ENST00000270722 CAPRIN1Q14444 709 aaKnown RBP14.08□□□□□ -0.16
PRDM16-201ENST00000270722 RCN1Q15293 331 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 TRADDQ15628 312 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 MAN2A1Q16706 1144 aa14.08□□□□□ -0.16
PRDM16-201ENST00000270722 RWDD4Q6NW29 188 aaKnown RBP14.07□□□□□ -0.16
PRDM16-201ENST00000270722 ATAD3AQ9NVI7 634 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 ZBTB39O15060 712 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 MTX1Q13505 466 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 MICALL2Q8IY33 904 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 DDHD1Q8NEL9 900 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 TTLL11Q8NHH1 800 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 SYTL2Q9HCH5 934 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 LOC102724428A0A0B4J2F2 783 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 MAPK13O15264 365 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 LZTS3O60299 673 aaPredicted RBP14.07□□□□□ -0.16
PRDM16-201ENST00000270722 SIK1P57059 783 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 LRRC63Q05C16 580 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 MCRS1Q96EZ8 462 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 GPR108Q9NPR9 543 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 TBC1D22BQ9NU19 505 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.07□□□□□ -0.16
PRDM16-201ENST00000270722 KIF21AQ7Z4S6 1674 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 ANP32DO95626 131 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 ZAP70P43403 619 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 AP3M2P53677 418 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 MFN1Q8IWA4 741 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 DCUN1D1Q96GG9 259 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 CCDC28BQ9BUN5 200 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 SYCP2Q9BX26 1530 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 RARS2Q5T160 578 aaKnown RBP14.07□□□□□ -0.16
PRDM16-201ENST00000270722 ZNF280DQ6N043 979 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 PSMB7Q99436 277 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 UBXN2AP68543 259 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 NAALADL2Q58DX5 795 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 NUGGCQ68CJ6 796 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 FOXP3Q9BZS1 431 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 PARVAQ9NVD7 372 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 KIF17Q9P2E2 1029 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 NEURL1BA8MQ27 555 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 NEK9Q8TD19 979 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 HIC2Q96JB3 615 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 ASNSD1Q9NWL6 643 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 PIM2Q9P1W9 311 aa14.07□□□□□ -0.16
PRDM16-201ENST00000270722 PODXLO00592 558 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 LCA5LO95447 670 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 RPLP2P05387 115 aaKnown RBP14.06□□□□□ -0.16
PRDM16-201ENST00000270722 CAPZA2P47755 286 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 MTFR1Q15390 333 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 STXBP2Q15833 593 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 ZNF560Q96MR9 790 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 ING2Q9H160 280 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 GCNT4Q9P109 453 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 PALD1Q9ULE6 856 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 KDM5AP29375 1690 aaKnown RBP14.06□□□□□ -0.16
PRDM16-201ENST00000270722 GPATCH8Q9UKJ3 1502 aaKnown RBP14.06□□□□□ -0.16
PRDM16-201ENST00000270722 PDE5AO76074 875 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 CDH2P19022 906 aaPredicted RBP14.06□□□□□ -0.16
PRDM16-201ENST00000270722 S100A1P23297 94 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 SFNP31947 248 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 KPNB1Q14974 876 aaKnown RBP14.06□□□□□ -0.16
PRDM16-201ENST00000270722 SYDE2Q5VT97 1194 aa14.06□□□□□ -0.16
PRDM16-201ENST00000270722 EPN1Q9Y6I3 576 aaPredicted RBP14.06□□□□□ -0.16
PRDM16-201ENST00000270722 MYO18AQ92614 2054 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms