RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 CBWD1Q9BRT8 395 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 TSGA10Q9BZW7 698 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 XPNPEP1Q9NQW7 623 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 SEPT9Q9UHD8 586 aaPredicted RBP18.17■□□□□ 0.5
CCDC40-201ENST00000269318 MYO6Q9UM54 1294 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 DUSP10Q9Y6W6 482 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 IGKV6D-21A0A0A0MT36 114 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 COPB2P35606 906 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 RTP1P59025 263 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 KIF5AQ12840 1032 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 DMP1Q13316 513 aaPredicted RBP18.17■□□□□ 0.5
CCDC40-201ENST00000269318 TUBB2AQ13885 445 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 ERCC6LQ2NKX8 1250 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 EHBP1Q8NDI1 1231 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 MNS1Q8NEH6 495 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 MCPH1Q8NEM0 835 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 TUBB2BQ9BVA1 445 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 CDC23Q9UJX2 597 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 TBX20Q9UMR3 447 aa18.17■□□□□ 0.5
CCDC40-201ENST00000269318 EFCAB8A8MWE9 144 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 TRIM49P0CI25 452 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 TRIM49CP0CI26 452 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 OSBPP22059 807 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 SMTNP53814 917 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 SOX10P56693 466 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 JAM2P57087 298 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 AMPD2Q01433 879 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 GFPT1Q06210 699 aaPredicted RBP18.16■□□□□ 0.5
CCDC40-201ENST00000269318 CBWD6Q4V339 395 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 TDRD12Q587J7 1177 aaKnown RBP18.16■□□□□ 0.5
CCDC40-201ENST00000269318 CBWD3Q5JTY5 395 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 CBWD5Q5RIA9 395 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 MTERF4Q7Z6M4 381 aaKnown RBP18.16■□□□□ 0.5
CCDC40-201ENST00000269318 PNMA8AQ86V59 439 aaPredicted RBP18.16■□□□□ 0.5
CCDC40-201ENST00000269318 MAP4K3Q8IVH8 894 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 KIFC3Q9BVG8 833 aa18.16■□□□□ 0.5
CCDC40-201ENST00000269318 AJAP1Q9UKB5 411 aaPredicted RBP18.16■□□□□ 0.5
CCDC40-201ENST00000269318 DNAJC25-GNG10A0A024R161 153 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 PJA2O43164 708 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 FARP2O94887 1054 aaPredicted RBP18.15■□□□□ 0.5
CCDC40-201ENST00000269318 MCCD1P59942 119 aaPredicted RBP18.15■□□□□ 0.5
CCDC40-201ENST00000269318 ASIC2Q16515 512 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 GPR162Q16538 588 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 IRF2BP2Q7Z5L9 587 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 PCIF1Q9H4Z3 704 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 ZNF302Q9NR11 478 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 HSPBP1Q9NZL4 362 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 CCDC169A6NNP5 214 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 MAPK13O15264 365 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 TGFB3P10600 412 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 INTS8Q75QN2 995 aaKnown RBP18.15■□□□□ 0.5
CCDC40-201ENST00000269318 XXYLT1Q8NBI6 393 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 RDH13Q8NBN7 331 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 MAP7D2Q96T17 732 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 ATP6V0A4Q9HBG4 840 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 KMT5AQ9NQR1 393 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 EXOC7Q9UPT5 735 aa18.15■□□□□ 0.5
CCDC40-201ENST00000269318 GSTTP1A0A1W2PQM5 241 aa18.14■□□□□ 0.49
CCDC40-201ENST00000269318 OATP04181 439 aa18.14■□□□□ 0.49
CCDC40-201ENST00000269318 ADSSP30520 456 aa18.14■□□□□ 0.49
CCDC40-201ENST00000269318 MAGEA1P43355 309 aa18.14■□□□□ 0.49
CCDC40-201ENST00000269318 KLHL30Q0D2K2 578 aa18.14■□□□□ 0.49
CCDC40-201ENST00000269318 SNAPC2Q13487 334 aa18.14■□□□□ 0.49
CCDC40-201ENST00000269318 IQCEQ6IPM2 695 aa18.14■□□□□ 0.49
CCDC40-201ENST00000269318 ZSWIM2Q8NEG5 633 aa18.14■□□□□ 0.49
CCDC40-201ENST00000269318 SPAG5Q96R06 1193 aa18.14■□□□□ 0.49
CCDC40-201ENST00000269318 PCYT2Q99447 389 aa18.14■□□□□ 0.49
CCDC40-201ENST00000269318 ADGRA3Q8IWK6 1321 aa18.14■□□□□ 0.49
CCDC40-201ENST00000269318 DENND3A2RUS2 1198 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 PGK2P07205 417 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 PRKCIP41743 596 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 ARID5AQ03989 594 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 NEDD9Q14511 834 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 SLC18A3Q16572 532 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 GJB7Q6PEY0 223 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 SECISBP2LQ93073 1101 aaKnown RBP18.13■□□□□ 0.49
CCDC40-201ENST00000269318 CEP89Q96ST8 783 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 MACROD2A1Z1Q3 448 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 UNCXA6NJT0 531 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 ANKRD63C9JTQ0 380 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 POTEJP0CG39 1038 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 KRT13P13646 458 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 VAMP7P51809 220 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 DLG4P78352 724 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 MYL7Q01449 175 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 MTERF2Q49AM1 385 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 C1orf220Q5T0J3 134 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 RSRC2Q7L4I2 434 aaKnown RBP18.13■□□□□ 0.49
CCDC40-201ENST00000269318 PDCL2Q8N4E4 241 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 UBXN4Q92575 508 aa18.13■□□□□ 0.49
CCDC40-201ENST00000269318 NIFKQ9BYG3 293 aaKnown RBP18.13■□□□□ 0.49
CCDC40-201ENST00000269318 MYH9P35579 1960 aaKnown RBP18.12■□□□□ 0.49
CCDC40-201ENST00000269318 CNGA1P29973 690 aa18.12■□□□□ 0.49
CCDC40-201ENST00000269318 PTK2Q05397 1052 aa18.12■□□□□ 0.49
CCDC40-201ENST00000269318 PAPD7Q5XG87 772 aaKnown RBP18.12■□□□□ 0.49
CCDC40-201ENST00000269318 SLC39A4Q6P5W5 647 aa18.12■□□□□ 0.49
CCDC40-201ENST00000269318 METTL7BQ6UX53 244 aa18.12■□□□□ 0.49
CCDC40-201ENST00000269318 TRAPPC11Q7Z392 1133 aa18.12■□□□□ 0.49
CCDC40-201ENST00000269318 LMO3Q8TAP4 145 aa18.12■□□□□ 0.49
CCDC40-201ENST00000269318 PLEKHO2Q8TD55 490 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms