RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 CBWD5Q5RIA9 395 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 DNAAF5Q86Y56 855 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 GLYCTKQ8IVS8 523 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 RNF217Q8TC41 542 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 CTNNBL1Q8WYA6 563 aaPredicted RBP11.2□□□□□ -0.62
LSG1-201ENST00000265245 CALR3Q96L12 384 aaKnown RBP11.2□□□□□ -0.62
LSG1-201ENST00000265245 ZNF341Q9BYN7 854 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 TMEM206Q9H813 350 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 CLSTN1O94985 981 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 RFX1P22670 979 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 PTGER2P43116 358 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 CFAP58Q5T655 872 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 RDH13Q8NBN7 331 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 WHAMMQ8TF30 809 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 HOOK2Q96ED9 719 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 PLEKHA4Q9H4M7 779 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 ATAD5Q96QE3 1844 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 ZSCAN5CA6NGD5 496 aaPredicted RBP11.2□□□□□ -0.62
LSG1-201ENST00000265245 RAD51CO43502 376 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 GALCP54803 685 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 PTPROQ16827 1216 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 MAEAQ7L5Y9 396 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 TSEN2Q8NCE0 465 aaKnown RBP11.2□□□□□ -0.62
LSG1-201ENST00000265245 AGBL3Q8NEM8 1001 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.2□□□□□ -0.62
LSG1-201ENST00000265245 SH3GL2Q99962 352 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.2□□□□□ -0.621e-7■□□□□ 8.4
LSG1-201ENST00000265245 SUCLA2Q9P2R7 463 aaPredicted RBP11.2□□□□□ -0.62
LSG1-201ENST00000265245 TMEM59LQ9UK28 342 aa11.2□□□□□ -0.62
LSG1-201ENST00000265245 ZNF646O15015 1829 aaPredicted RBP11.19□□□□□ -0.62
LSG1-201ENST00000265245 MAPK7Q13164 816 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 INTS8Q75QN2 995 aaKnown RBP11.19□□□□□ -0.62
LSG1-201ENST00000265245 NIPA1Q7RTP0 329 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 DEFB132Q7Z7B7 95 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 NIM1KQ8IY84 436 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 DAW1Q8N136 415 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 METTL13Q8N6R0 699 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 RFFLQ8WZ73 363 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 SEPT11Q9NVA2 429 aaKnown RBP11.19□□□□□ -0.62
LSG1-201ENST00000265245 CCDC188H7C350 402 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 NFIBO00712 420 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 PPP1R37O75864 691 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 TMEM253P0C7T8 217 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 INPP5BP32019 993 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 HLTFQ14527 1009 aaKnown RBP eCLIP11.19□□□□□ -0.62
LSG1-201ENST00000265245 SLFN11Q7Z7L1 901 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 CPXCR1Q8N123 301 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 MTMR14Q8NCE2 650 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 TCEAL9Q9UHQ7 104 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 AMFRQ9UKV5 643 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 ZNRF3Q9ULT6 936 aa11.19□□□□□ -0.62
LSG1-201ENST00000265245 NOC2LQ9Y3T9 749 aaKnown RBP11.19□□□□□ -0.62
LSG1-201ENST00000265245 GOLGB1Q14789 3259 aaKnown RBP11.19□□□□□ -0.62
LSG1-201ENST00000265245 KRIT1O00522 736 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 TNFAIP3P21580 790 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 QARSP47897 775 aaKnown RBP11.18□□□□□ -0.62
LSG1-201ENST00000265245 GUCY2FP51841 1108 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 ARHGAP44Q17R89 818 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 SLC30A5Q8TAD4 765 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 LNX1Q8TBB1 728 aaPredicted RBP11.18□□□□□ -0.62
LSG1-201ENST00000265245 CASKIN2Q8WXE0 1202 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 LPAR1Q92633 364 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 ACCSQ96QU6 501 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 STRA6Q9BX79 667 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 ZHX2Q9Y6X8 837 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 RPTORQ8N122 1335 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 WDR46O15213 610 aaKnown RBP11.18□□□□□ -0.62
LSG1-201ENST00000265245 MAPTP10636 758 aaKnown RBP11.18□□□□□ -0.62
LSG1-201ENST00000265245 ALAS1P13196 640 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 MTMR1Q13613 665 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 MREGQ8N565 214 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 EIF1ADQ8N9N8 165 aaKnown RBP11.18□□□□□ -0.62
LSG1-201ENST00000265245 SCFD2Q8WU76 684 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 TAF1DQ9H5J8 278 aaPredicted RBP11.18□□□□□ -0.62
LSG1-201ENST00000265245 COL20A1Q9P218 1284 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 DBR1Q9UK59 544 aaKnown RBP11.18□□□□□ -0.62
LSG1-201ENST00000265245 ZNF536O15090 1300 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 ECM2O94769 699 aaPredicted RBP11.18□□□□□ -0.62
LSG1-201ENST00000265245 ABCB4P21439 1286 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 CUL1Q13616 776 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 TKFCQ3LXA3 575 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 LRRC31Q6UY01 552 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 NT5DC3Q86UY8 548 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 VTI1AQ96AJ9 217 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 ZIM3Q96PE6 472 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 AP1M1Q9BXS5 423 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 TBC1D22BQ9NU19 505 aa11.18□□□□□ -0.62
LSG1-201ENST00000265245 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
LSG1-201ENST00000265245 SMCHD1A6NHR9 2005 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 LRRN2O75325 713 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 FAM153BP0C7A2 387 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 PLS3P13797 630 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 RARRES1P49788 294 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 SF3B2Q13435 895 aaKnown RBP11.17□□□□□ -0.62
LSG1-201ENST00000265245 FAM153CQ494X1 144 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 PCNX4Q63HM2 1172 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 IL31RAQ8NI17 732 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 IWS1Q96ST2 819 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 ISCUQ9H1K1 167 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 AGO4Q9HCK5 861 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms