RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ODR4Q5SWX8 454 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 NOL9Q5SY16 702 aaKnown RBP12.16□□□□□ -0.46
MSH3-201ENST00000265081 ALKBH5Q6P6C2 394 aaKnown RBP12.16□□□□□ -0.46
MSH3-201ENST00000265081 GPRASP2Q96D09 838 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 PDCD2LQ9BRP1 358 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 COQ4Q9Y3A0 265 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 MAFGO15525 162 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 CHMP2AO43633 222 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 MTA2O94776 668 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 CCNE2O96020 404 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 EGFRP00533 1210 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 ECHS1P30084 290 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 UBXN2AP68543 259 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 UGCGQ16739 394 aa12.16□□□□□ -0.46
MSH3-201ENST00000265081 INTS8Q75QN2 995 aaKnown RBP12.16□□□□□ -0.46
MSH3-201ENST00000265081 LMNB1P20700 586 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 PHLDB3Q6NSJ2 640 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 ZNF746Q6NUN9 644 aaPredicted RBP12.15□□□□□ -0.46
MSH3-201ENST00000265081 NT5DC3Q86UY8 548 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 ACBD3Q9H3P7 528 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 ZHX3Q9H4I2 956 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 ARHGEF35A5YM69 484 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 PPP1R12BO60237 982 aaPredicted RBP12.15□□□□□ -0.46
MSH3-201ENST00000265081 MTMR1Q13613 665 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 DCAF17Q5H9S7 520 aaPredicted RBP12.15□□□□□ -0.46
MSH3-201ENST00000265081 GJB7Q6PEY0 223 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 CD302Q8IX05 232 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 CAGE1Q8TC20 777 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 PLEKHO2Q8TD55 490 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 SPIRE2Q8WWL2 714 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 ACCSQ96QU6 501 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 EHD2Q9NZN4 543 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 FRMD4BQ9Y2L6 1034 aa12.15□□□□□ -0.46
MSH3-201ENST00000265081 YWHABP31946 246 aaKnown RBP12.15□□□□□ -0.47
MSH3-201ENST00000265081 HS2ST1Q7LGA3 356 aa12.15□□□□□ -0.47
MSH3-201ENST00000265081 MAP4K3Q8IVH8 894 aa12.15□□□□□ -0.47
MSH3-201ENST00000265081 ANKRD13CQ8N6S4 541 aa12.15□□□□□ -0.47
MSH3-201ENST00000265081 TAAR1Q96RJ0 339 aa12.15□□□□□ -0.47
MSH3-201ENST00000265081 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.47
MSH3-201ENST00000265081 ISCUQ9H1K1 167 aa12.15□□□□□ -0.47
MSH3-201ENST00000265081 C17orf75Q9HAS0 396 aa12.15□□□□□ -0.47
MSH3-201ENST00000265081 DIS3Q9Y2L1 958 aaKnown RBP12.15□□□□□ -0.47
MSH3-201ENST00000265081 MYPNQ86TC9 1320 aa12.15□□□□□ -0.47
MSH3-201ENST00000265081 RPS6P62753 249 aaKnown RBP12.14□□□□□ -0.47
MSH3-201ENST00000265081 CLDN10P78369 228 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 KRT76Q01546 638 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 POU5F1Q01860 360 aaKnown RBP12.14□□□□□ -0.47
MSH3-201ENST00000265081 VSIG10LQ86VR7 867 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 KSR1Q8IVT5 923 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 MS4A14Q96JA4 679 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 TAOK3Q9H2K8 898 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 DDX3YO15523 660 aaKnown RBP12.14□□□□□ -0.47
MSH3-201ENST00000265081 PSMC5P62195 406 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 MYL7Q01449 175 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 SMYD5Q6GMV2 418 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 SCYL3Q8IZE3 742 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 SPAG5Q96R06 1193 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 DNAJC12Q9UKB3 198 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 STAM2O75886 525 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 KCNA2P16389 499 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 DRC1Q96MC2 740 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 SMARCAL1Q9NZC9 954 aa12.14□□□□□ -0.47
MSH3-201ENST00000265081 LARSQ9P2J5 1176 aaKnown RBP12.14□□□□□ -0.47
MSH3-201ENST00000265081 RGS20O76081 388 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 PAFAH1B1P43034 410 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 BACE1P56817 501 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 DRAP1Q14919 205 aaPredicted RBP12.13□□□□□ -0.47
MSH3-201ENST00000265081 ALS2CLQ60I27 953 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 SYCE1Q8N0S2 351 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 TMEM161BQ8NDZ6 487 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 PIK3R5Q8WYR1 880 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 GOLGB1Q14789 3259 aaKnown RBP12.13□□□□□ -0.47
MSH3-201ENST00000265081 BACH1O14867 736 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 FTCDO95954 541 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 GLI1P08151 1106 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 ADSSP30520 456 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 CXCR5P32302 372 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 ZYXQ15942 572 aaKnown RBP12.13□□□□□ -0.47
MSH3-201ENST00000265081 CCDC70Q6NSX1 233 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 RFFLQ8WZ73 363 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 MFSD14AQ96MC6 490 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 ZNF214Q9UL59 606 aaPredicted RBP12.13□□□□□ -0.47
MSH3-201ENST00000265081 FAN1Q9Y2M0 1017 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 WDR64B1ANS9 1081 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 SCP2P22307 547 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 GTF2H1P32780 548 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 DALRD3Q5D0E6 543 aaKnown RBP12.13□□□□□ -0.47
MSH3-201ENST00000265081 TAF3Q5VWG9 929 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 IWS1Q96ST2 819 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 RPAP3Q9H6T3 665 aaPredicted RBP12.13□□□□□ -0.47
MSH3-201ENST00000265081 RAVER2Q9HCJ3 691 aaKnown RBP12.13□□□□□ -0.47
MSH3-201ENST00000265081 NOCTQ9UK39 431 aaKnown RBP12.13□□□□□ -0.47
MSH3-201ENST00000265081 IGSF9BQ9UPX0 1349 aa12.13□□□□□ -0.47
MSH3-201ENST00000265081 ATP9AO75110 1047 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 DLG4P78352 724 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 PPP3CAQ08209 521 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 SH3D19Q5HYK7 790 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 C11orf63Q6NUN7 778 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 ANO5Q75V66 913 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms