RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 UBE2OQ9C0C9 1292 aaKnown RBP20.33■□□□□ 0.84
SDF4-201ENST00000263741 NOC2LQ9Y3T9 749 aaKnown RBP20.33■□□□□ 0.84
SDF4-201ENST00000263741 DYMQ7RTS9 669 aa20.32■□□□□ 0.84
SDF4-201ENST00000263741 HPSEQ9Y251 543 aa20.32■□□□□ 0.84
SDF4-201ENST00000263741 TRAK2O60296 914 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 RPLP2P05387 115 aaKnown RBP20.31■□□□□ 0.84
SDF4-201ENST00000263741 CRYBB1P53674 252 aaPredicted RBP20.31■□□□□ 0.84
SDF4-201ENST00000263741 ZNF365Q70YC5 407 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 OTOP2Q7RTS6 562 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 GRAMD1CQ8IYS0 662 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 KCTD17Q8N5Z5 321 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 DBF4BQ8NFT6 615 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 IFIH1Q9BYX4 1025 aaKnown RBP20.31■□□□□ 0.84
SDF4-201ENST00000263741 A0A1W2PQ27 194 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 A0A1W2PQ64 194 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 A0A1W2PQD8 194 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 GOLGA6L4A6NEF3 574 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 MYMKA6NI61 221 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 LRRIQ4A6NIV6 560 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 KRT18P05783 430 aaKnown RBP20.31■□□□□ 0.84
SDF4-201ENST00000263741 CASP1P29466 404 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 FAM228AQ86W67 206 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 MINDY3Q9H8M7 445 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 IFT122Q9HBG6 1241 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 SERTAD1Q9UHV2 236 aa20.31■□□□□ 0.84
SDF4-201ENST00000263741 CXCL10P02778 98 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 GUCY2CP25092 1073 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 RFC2P35250 354 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 PLEKHG4Q58EX7 1191 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 TMEM240Q5SV17 173 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 TSHZ1Q6ZSZ6 1077 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 IQUBQ8NA54 791 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 ADGRA3Q8IWK6 1321 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 DARSP14868 501 aaKnown RBP20.3■□□□□ 0.84
SDF4-201ENST00000263741 SYKP43405 635 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 NFX1Q12986 1120 aaKnown RBP20.3■□□□□ 0.84
SDF4-201ENST00000263741 SV2BQ7L1I2 683 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 ZHX3Q9H4I2 956 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 PADI3Q9ULW8 664 aa20.3■□□□□ 0.84
SDF4-201ENST00000263741 ACTN4O43707 911 aaKnown RBP20.29■□□□□ 0.84
SDF4-201ENST00000263741 RPS6KA5O75582 802 aa20.29■□□□□ 0.84
SDF4-201ENST00000263741 EIF4BP23588 611 aaKnown RBP20.29■□□□□ 0.84
SDF4-201ENST00000263741 PEX3P56589 373 aa20.29■□□□□ 0.84
SDF4-201ENST00000263741 PAK2Q13177 524 aa20.29■□□□□ 0.84
SDF4-201ENST00000263741 MXD4Q14582 209 aaPredicted RBP20.29■□□□□ 0.84
SDF4-201ENST00000263741 SHHQ15465 462 aa20.29■□□□□ 0.84
SDF4-201ENST00000263741 LONRF3Q496Y0 759 aa20.29■□□□□ 0.84
SDF4-201ENST00000263741 ZNF410Q86VK4 478 aa20.29■□□□□ 0.84
SDF4-201ENST00000263741 AFMP43652 599 aa20.28■□□□□ 0.84
SDF4-201ENST00000263741 GIT2Q14161 759 aa20.28■□□□□ 0.84
SDF4-201ENST00000263741 RPUSD2Q8IZ73 545 aaKnown RBP20.28■□□□□ 0.84
SDF4-201ENST00000263741 DDX12PQ92771 950 aa20.28■□□□□ 0.84
SDF4-201ENST00000263741 KIFAP3Q92845 792 aa20.28■□□□□ 0.84
SDF4-201ENST00000263741 GCOM2Q9BZD3 368 aaPredicted RBP20.28■□□□□ 0.84
SDF4-201ENST00000263741 CXXC1Q9P0U4 656 aaPredicted RBP20.28■□□□□ 0.84
SDF4-201ENST00000263741 FAM237AA0A1B0GTK4 181 aa20.28■□□□□ 0.84
SDF4-201ENST00000263741 PRPF38BQ5VTL8 546 aaKnown RBP20.28■□□□□ 0.84
SDF4-201ENST00000263741 TMEM87AQ8NBN3 555 aa20.28■□□□□ 0.84
SDF4-201ENST00000263741 DRC1Q96MC2 740 aa20.28■□□□□ 0.84
SDF4-201ENST00000263741 BLZF1Q9H2G9 400 aa20.28■□□□□ 0.84
SDF4-201ENST00000263741 ST3GAL5Q9UNP4 418 aa20.28■□□□□ 0.84
SDF4-201ENST00000263741 PRPF40AO75400 957 aaKnown RBP20.27■□□□□ 0.84
SDF4-201ENST00000263741 PARNO95453 639 aaKnown RBP20.27■□□□□ 0.84
SDF4-201ENST00000263741 LIG1P18858 919 aa20.27■□□□□ 0.84
SDF4-201ENST00000263741 IBSPP21815 317 aaPredicted RBP20.27■□□□□ 0.84
SDF4-201ENST00000263741 PHKA2P46019 1235 aa20.27■□□□□ 0.84
SDF4-201ENST00000263741 TFDP1Q14186 410 aa20.27■□□□□ 0.84
SDF4-201ENST00000263741 CSPP1Q1MSJ5 1256 aa20.27■□□□□ 0.84
SDF4-201ENST00000263741 CNKSR3Q6P9H4 555 aa20.27■□□□□ 0.84
SDF4-201ENST00000263741 PSRC1Q6PGN9 363 aaPredicted RBP20.27■□□□□ 0.84
SDF4-201ENST00000263741 SEPT8Q92599 483 aa20.27■□□□□ 0.84
SDF4-201ENST00000263741 TMX1Q9H3N1 280 aa20.27■□□□□ 0.84
SDF4-201ENST00000263741 ERVK-5Q9HDB9 667 aa20.27■□□□□ 0.84
SDF4-201ENST00000263741 KBTBD4Q9NVX7 518 aa20.27■□□□□ 0.84
SDF4-201ENST00000263741 KCND2Q9NZV8 630 aa20.27■□□□□ 0.84
SDF4-201ENST00000263741 USP20Q9Y2K6 914 aa20.27■□□□□ 0.84
SDF4-201ENST00000263741 FSD2A1L4K1 749 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 CCDC169A6NNP5 214 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 ZBBXA8MT70 800 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 INO80B-WBP1J3KQ70 363 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 ASAP2O43150 1006 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 FGBP02675 491 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 PFKMP08237 780 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 LINC01599Q8WXQ3 324 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 INO80BQ9C086 356 aaPredicted RBP20.26■□□□□ 0.83
SDF4-201ENST00000263741 TNMDQ9H2S6 317 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 PRO3102Q9H379 93 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 COLQQ9Y215 455 aaPredicted RBP20.26■□□□□ 0.83
SDF4-201ENST00000263741 TBCAO75347 108 aaKnown RBP20.26■□□□□ 0.83
SDF4-201ENST00000263741 FAM13AO94988 1023 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 NPTX2P47972 431 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 PTENP60484 403 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 SKOR2Q2VWA4 1001 aaPredicted RBP20.26■□□□□ 0.83
SDF4-201ENST00000263741 TMCO2Q7Z6W1 182 aaPredicted RBP20.26■□□□□ 0.83
SDF4-201ENST00000263741 CEP57L1Q8IYX8 460 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 DEPTORQ8TB45 409 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 DNAJC19Q96DA6 116 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 IFT74Q96LB3 600 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 CUEDC2Q9H467 287 aa20.26■□□□□ 0.83
SDF4-201ENST00000263741 MGEA5O60502 916 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms