RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 NT5C1B-RDH14C9J2C7 533 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 GAS7O60861 476 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 ZC3H11AO75152 810 aaKnown RBP eCLIP10.1□□□□□ -0.79
LCN1-201ENST00000263598 FGFR4P22455 802 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 SFNP31947 248 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 CIITAP33076 1130 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 NBL1P41271 181 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 DNM2P50570 870 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 CLCN5P51795 746 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 POLGP54098 1239 aaPredicted RBP10.1□□□□□ -0.79
LCN1-201ENST00000263598 AKAP17AQ02040 695 aaKnown RBP10.1□□□□□ -0.79
LCN1-201ENST00000263598 ASTLQ6HA08 431 aaPredicted RBP10.1□□□□□ -0.79
LCN1-201ENST00000263598 CABP7Q86V35 215 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 PPFIBP1Q86W92 1011 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 ACSF2Q96CM8 615 aaPredicted RBP10.1□□□□□ -0.79
LCN1-201ENST00000263598 RIT2Q99578 217 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 GCOM2Q9BZD3 368 aaPredicted RBP10.1□□□□□ -0.79
LCN1-201ENST00000263598 ZBP1Q9H171 429 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 FAM217BQ9NTX9 383 aaPredicted RBP10.1□□□□□ -0.79
LCN1-201ENST00000263598 STK39Q9UEW8 545 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 LIMD1Q9UGP4 676 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 IRAK3Q9Y616 596 aa10.1□□□□□ -0.79
LCN1-201ENST00000263598 CHMP2AO43633 222 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 ZNF862O60290 1169 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 ASGR2P07307 311 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 WEE2P0C1S8 567 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 CTSAP10619 480 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 EPCAMP16422 314 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 SFPQP23246 707 aaKnown RBP eCLIP10.09□□□□□ -0.79
LCN1-201ENST00000263598 ADD1P35611 737 aaKnown RBP10.09□□□□□ -0.79
LCN1-201ENST00000263598 PHKA2P46019 1235 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 JAK3P52333 1124 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 RNASELQ05823 741 aaKnown RBP10.09□□□□□ -0.79
LCN1-201ENST00000263598 TSGA10IPQ3SY00 556 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 TWF2Q6IBS0 349 aaKnown RBP10.09□□□□□ -0.79
LCN1-201ENST00000263598 GLB1LQ6UWU2 654 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 ASCL5Q7RTU5 278 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 DDX53Q86TM3 631 aaKnown RBP10.09□□□□□ -0.79
LCN1-201ENST00000263598 C12orf76Q8N812 135 aaPredicted RBP10.09□□□□□ -0.79
LCN1-201ENST00000263598 CCDC136Q96JN2 1154 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 TRAIPQ9BWF2 469 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 INO80BQ9C086 356 aaPredicted RBP10.09□□□□□ -0.79
LCN1-201ENST00000263598 SMOC2Q9H3U7 446 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 CYP26B1Q9NR63 512 aa10.09□□□□□ -0.79
LCN1-201ENST00000263598 PRR23AA6NEV1 266 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 MSH4O15457 936 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 PRPF3O43395 683 aaKnown RBP10.08□□□□□ -0.8
LCN1-201ENST00000263598 RAB27AP51159 221 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 USP11P51784 963 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 ADCK5Q3MIX3 580 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 NOMO2Q5JPE7 1267 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 LRCH2Q5VUJ6 765 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 TMC5Q6UXY8 1006 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 OTOP3Q7RTS5 596 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 FLCNQ8NFG4 579 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 CCDC148Q8NFR7 591 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 RDM1Q8NG50 284 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 SLC22A17Q8WUG5 538 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 AUTS2Q8WXX7 1259 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 NKD2Q969F2 451 aaPredicted RBP10.08□□□□□ -0.8
LCN1-201ENST00000263598 LENG9Q96B70 501 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 PGBD4Q96DM1 585 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 IGSF21Q96ID5 467 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 TEKT3Q9BXF9 490 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 EMILIN2Q9BXX0 1053 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 NIFKQ9BYG3 293 aaKnown RBP10.08□□□□□ -0.8
LCN1-201ENST00000263598 SFXN1Q9H9B4 322 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 SEPT9Q9UHD8 586 aaPredicted RBP10.08□□□□□ -0.8
LCN1-201ENST00000263598 PIN4Q9Y237 131 aaKnown RBP10.08□□□□□ -0.8
LCN1-201ENST00000263598 CFAP54Q96N23 3096 aa10.08□□□□□ -0.8
LCN1-201ENST00000263598 EVPLQ92817 2033 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 MYO15AQ9UKN7 3530 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 A0A087WZ62 844 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 ADAMTS3O15072 1205 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 CSDE1O75534 798 aaKnown RBP10.07□□□□□ -0.8
LCN1-201ENST00000263598 GALTP07902 379 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 KLRC2P26717 231 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 DRP2Q13474 957 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 TDGQ13569 410 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 TARBP2Q15633 366 aaKnown RBP10.07□□□□□ -0.8
LCN1-201ENST00000263598 UGCGQ16739 394 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 LONRF3Q496Y0 759 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 MTERF2Q49AM1 385 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 XKR3Q5GH77 459 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 KANK3Q6NY19 840 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 CCDC149Q6ZUS6 474 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 MIER3Q7Z3K6 550 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 GPR149Q86SP6 731 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 ZNF410Q86VK4 478 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 TMEM173Q86WV6 379 aaPredicted RBP10.07□□□□□ -0.8
LCN1-201ENST00000263598 RASEFQ8IZ41 740 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 URGCPQ8TCY9 931 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 SLC5A5Q92911 643 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 LPPQ93052 612 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 FDXACB1Q9BRP7 624 aaPredicted RBP10.07□□□□□ -0.8
LCN1-201ENST00000263598 GBP3Q9H0R5 595 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 UNC45AQ9H3U1 944 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 NRDE2Q9H7Z3 1164 aa10.07□□□□□ -0.8
LCN1-201ENST00000263598 FAM105AQ9NUU6 356 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms