RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PHLDB3Q6NSJ2 640 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 EPM2AIP1Q7L775 607 aaPredicted RBP9.9□□□□□ -0.83
MSH4-201ENST00000263187 OTUD6AQ7L8S5 288 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 CCDC125Q86Z20 511 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 ACTRT1Q8TDG2 376 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 IPO4Q8TEX9 1081 aaKnown RBP9.9□□□□□ -0.83
MSH4-201ENST00000263187 RAPGEF5Q92565 580 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 PLCB1Q9NQ66 1216 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 DDX20Q9UHI6 824 aaKnown RBP9.9□□□□□ -0.83
MSH4-201ENST00000263187 VAV3Q9UKW4 847 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 GAS7O60861 476 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 SSTR3P32745 418 aaPredicted RBP9.89□□□□□ -0.83
MSH4-201ENST00000263187 DR1Q01658 176 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 EPC2Q52LR7 807 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 PPP4R3CPQ6ZMV5 832 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 C15orf52Q6ZUT6 534 aaKnown RBP9.89□□□□□ -0.83
MSH4-201ENST00000263187 MIGA2Q7L4E1 593 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 TMC3Q7Z5M5 1100 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 TAX1BP1Q86VP1 789 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 CCDC26Q8TAB7 109 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 FBXO25Q8TCJ0 367 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 LRRC45Q96CN5 670 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 CABS1Q96KC9 395 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 CCDC114Q96M63 670 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 FAM118BQ9BPY3 351 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 INTS2Q9H0H0 1204 aaKnown RBP9.89□□□□□ -0.83
MSH4-201ENST00000263187 HOMER2Q9NSB8 354 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 FBXO28Q9NVF7 368 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 GMNCA6NCL1 334 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 POLRMTO00411 1230 aaKnown RBP9.89□□□□□ -0.83
MSH4-201ENST00000263187 BMP3P12645 472 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 JAM2P57087 298 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 IFI35P80217 286 aaPredicted RBP9.89□□□□□ -0.83
MSH4-201ENST00000263187 SNX1Q13596 522 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 TRIP13Q15645 432 aaPredicted RBP9.89□□□□□ -0.83
MSH4-201ENST00000263187 DAB2IPQ5VWQ8 1189 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 CDAN1Q8IWY9 1227 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 CCDC127Q96BQ5 260 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 FMO2Q99518 471 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 PARVGQ9HBI0 331 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 PRR12Q9ULL5 1215 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 FRMD4BQ9Y2L6 1034 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 BZW2Q9Y6E2 419 aaKnown RBP9.89□□□□□ -0.83
MSH4-201ENST00000263187 PITPNM2Q9BZ72 1349 aa9.89□□□□□ -0.83
MSH4-201ENST00000263187 PPP1R12BO60237 982 aaPredicted RBP9.88□□□□□ -0.83
MSH4-201ENST00000263187 FTLP02792 175 aaPredicted RBP9.88□□□□□ -0.83
MSH4-201ENST00000263187 VPS41P49754 854 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 CUL1Q13616 776 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 CCDC121Q6ZUS5 278 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 HS2ST1Q7LGA3 356 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 ARHGEF19Q8IW93 802 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 CCDC13Q8IYE1 715 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 LMBR1Q8WVP7 490 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 UPF1Q92900 1129 aaKnown RBP eCLIP9.88□□□□□ -0.83
MSH4-201ENST00000263187 MTFR1LQ9H019 292 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 PI4KBQ9UBF8 816 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 DBR1Q9UK59 544 aaKnown RBP9.88□□□□□ -0.83
MSH4-201ENST00000263187 ZMYM2Q9UBW7 1377 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 CTNND1O60716 968 aaKnown RBP9.88□□□□□ -0.83
MSH4-201ENST00000263187 FAM107AO95990 144 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 PPP2R2AP63151 447 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 MYL7Q01449 175 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 LRRC14Q15048 493 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 CEP57Q86XR8 500 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 MREGQ8N565 214 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 SCLT1Q96NL6 688 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 CAMKK2Q96RR4 588 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 CSRNP1Q96S65 589 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 AZI2Q9H6S1 392 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 HAUS2Q9NVX0 235 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 ALG6Q9Y672 507 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 MAST2Q6P0Q8 1798 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 CDK5RAP2Q96SN8 1893 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 ADAMTSL1Q8N6G6 1762 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 CYP3A7-CYP3A51PA0A087WV96 503 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 EYA4O95677 639 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 FERP16591 822 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 CYP3A7P24462 503 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 SLC29A2Q14542 456 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 OTOP1Q7RTM1 612 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 SP8Q8IXZ3 490 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 SLC30A5Q8TAD4 765 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 RUBCNQ92622 972 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 CBWD1Q9BRT8 395 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 KIFC3Q9BVG8 833 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 SEMA4AQ9H3S1 761 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 METTL14Q9HCE5 456 aaKnown RBP9.88□□□□□ -0.83
MSH4-201ENST00000263187 GPRC5CQ9NQ84 441 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 AGPAT3Q9NRZ7 376 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 USP20Q9Y2K6 914 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 STXBP5LQ9Y2K9 1186 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 DAAM1Q9Y4D1 1078 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 EMSYQ7Z589 1322 aa9.88□□□□□ -0.83
MSH4-201ENST00000263187 PLIN4Q96Q06 1357 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 ANKRD63C9JTQ0 380 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 K7ENM7 598 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 DNM1LO00429 736 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 SREBF1P36956 1147 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 NT5C2P49902 561 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 DGKZQ13574 1117 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms