RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 BUB1O43683 1085 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 USP2O75604 605 aaPredicted RBP14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 PSAPP07602 524 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 TCP1P17987 556 aaKnown RBP14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 STAT1P42224 750 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 NCKAP1LP55160 1127 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 PEX3P56589 373 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 MYL7Q01449 175 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 KIAA0753Q2KHM9 967 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 SH3D19Q5HYK7 790 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 FAM102BQ5T8I3 360 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 PLA2G4FQ68DD2 849 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 INTS8Q75QN2 995 aaKnown RBP14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 TRMT1LQ7Z2T5 733 aaKnown RBP14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 ZNF571Q7Z3V5 609 aaPredicted RBP14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 FMNL3Q8IVF7 1028 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 ATP6V0A1Q93050 837 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 PNKPQ96T60 521 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 SH2D3AQ9BRG2 576 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 DOCK5Q9H7D0 1870 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 TSKSQ9UJT2 592 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 HYOU1Q9Y4L1 999 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 NFASCO94856 1347 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 PTPRFP10586 1907 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 ZNF185O15231 689 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 TRIM49P0CI25 452 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 TRIM49CP0CI26 452 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 KCNA2P16389 499 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 SMTNP53814 917 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 NPEPPSP55786 919 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 GNPTABQ3T906 1256 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 RDH13Q8NBN7 331 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 INTS2Q9H0H0 1204 aaKnown RBP14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 JPH1Q9HDC5 661 aaPredicted RBP14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 GABBR1Q9UBS5 961 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 AJAP1Q9UKB5 411 aaPredicted RBP14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 EXOC7Q9UPT5 735 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 BTNL10A8MVZ5 291 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 SLC16A4O15374 487 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 N4BP1O75113 896 aaKnown RBP14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 KLRC1P26715 233 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 CETN1Q12798 172 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 LONRF2Q1L5Z9 754 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 CBWD6Q4V339 395 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 CBWD3Q5JTY5 395 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 CBWD5Q5RIA9 395 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 GJB7Q6PEY0 223 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 ANO5Q75V66 913 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 XXYLT1Q8NBI6 393 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 CHST13Q8NET6 341 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 KIFAP3Q92845 792 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 HVCN1Q96D96 273 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 FAM212AQ96EL1 285 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 OSBPL9Q96SU4 736 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 STK33Q9BYT3 514 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 PCIF1Q9H4Z3 704 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 GPRC5CQ9NQ84 441 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 SLC9A2Q9UBY0 812 aa14.09□□□□□ -0.15
SPTLC1-201ENST00000262554 LCTP09848 1927 aa14.08□□□□□ -0.15
SPTLC1-201ENST00000262554 MAPK13O15264 365 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 RGS20O76081 388 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 TBC1D8O95759 1140 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 CCDC172P0C7W6 258 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 RFX1P22670 979 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 MCM3P25205 808 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 SOX5P35711 763 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 VAMP7P51809 220 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 DMP1Q13316 513 aaPredicted RBP14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 VGLL4Q14135 290 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 WDR93Q6P2C0 686 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 NFRKBQ6P4R8 1299 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 CREG2Q8IUH2 290 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 CEP170P1Q96L14 293 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 HSPBP1Q9NZL4 362 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 NAGPAQ9UK23 515 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 DNAJC12Q9UKB3 198 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 CSADQ9Y600 493 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 SNCAIPQ9Y6H5 919 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 ATP8B3O60423 1300 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 MYH9P35579 1960 aaKnown RBP14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 CCDC169A6NNP5 214 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 SPATA31C2B4DYI2 1134 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 F8VZ95 297 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 GFPT2O94808 682 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 IFI16Q16666 785 aaKnown RBP14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 CCDC181Q5TID7 509 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 CCDC70Q6NSX1 233 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 ALKBH5Q6P6C2 394 aaKnown RBP14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 ZNF572Q7Z3I7 529 aaPredicted RBP14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 DCPSQ96C86 337 aaKnown RBP14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 CBWD1Q9BRT8 395 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 PACSIN1Q9BY11 444 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 C17orf75Q9HAS0 396 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 APEX2Q9UBZ4 518 aa14.08□□□□□ -0.16
SPTLC1-201ENST00000262554 OTOFQ9HC10 1997 aa14.07□□□□□ -0.16
SPTLC1-201ENST00000262554 TARSL2A2RTX5 802 aaKnown RBP14.07□□□□□ -0.16
SPTLC1-201ENST00000262554 TISP43B9A030 160 aa14.07□□□□□ -0.16
SPTLC1-201ENST00000262554 PDE2AO00408 941 aaPredicted RBP14.07□□□□□ -0.16
SPTLC1-201ENST00000262554 P4HA2O15460 535 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms