RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 KCTD17Q8N5Z5 321 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 RBM46Q8TBY0 533 aaKnown RBP13.02□□□□□ -0.33
SPG11-201ENST00000261866 ATXN7L3BQ96GX2 97 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 SH3GLB2Q9NR46 395 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 INTS9Q9NV88 658 aaKnown RBP13.02□□□□□ -0.33
SPG11-201ENST00000261866 CPSF2Q9P2I0 782 aaKnown RBP13.02□□□□□ -0.33
SPG11-201ENST00000261866 HPCAL4Q9UM19 191 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 PALMO75781 387 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 FGGP02679 453 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 NOP14P78316 857 aaKnown RBP13.02□□□□□ -0.33
SPG11-201ENST00000261866 DR1Q01658 176 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 TNFAIP2Q03169 654 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 LMNB2Q03252 620 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 TRMT2AQ8IZ69 625 aaKnown RBP13.02□□□□□ -0.33
SPG11-201ENST00000261866 HDLBPQ00341 1268 aaKnown RBP13.02□□□□□ -0.33
SPG11-201ENST00000261866 ELMSAN1Q6PJG2 1045 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 RNF135Q8IUD6 432 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 EFCAB13Q8IY85 973 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 EDEM3Q9BZQ6 932 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 CCDC78A2IDD5 438 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 NCK2O43639 380 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 LDHAP00338 332 aaKnown RBP13.02□□□□□ -0.33
SPG11-201ENST00000261866 MAML1Q92585 1016 aa13.02□□□□□ -0.33
SPG11-201ENST00000261866 ZNF70Q9UC06 446 aaPredicted RBP13.02□□□□□ -0.33
SPG11-201ENST00000261866 NMT1P30419 496 aaKnown RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 RASSF2P50749 326 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 YAF2Q8IY57 180 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 ZKSCAN4Q969J2 545 aaPredicted RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 FAM167AQ96KS9 214 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 TBC1D22BQ9NU19 505 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 KIF28PB7ZC32 967 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 KBTBD13C9JR72 458 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 PPP2R5EQ16537 467 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 SLC10A5Q5PT55 438 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 CDC42EP5Q6NZY7 148 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 PPWD1Q96BP3 646 aaKnown RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 PREX2Q70Z35 1606 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 ARHGEF37A1IGU5 675 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 MAFGO15525 162 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 VAMP7P51809 220 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 BHMTQ93088 406 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 HPS4Q9NQG7 708 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 EXOC1LA0A1B0GW35 172 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 LRRC53A6NM62 1247 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 GNA15P30679 374 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 YWHABP31946 246 aaKnown RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 XXYLT1Q8NBI6 393 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 ADRA2BP18089 450 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 ACOT2P49753 483 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 MKRN4PQ13434 485 aaPredicted RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 ALKBH5Q6P6C2 394 aaKnown RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 BCAS4Q8TDM0 211 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 KRT82Q9NSB4 513 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 SUCLA2Q9P2R7 463 aaPredicted RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 PTCH1Q13635 1447 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 HNRNPCL2B2RXH8 293 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 HNRNPCL1O60812 293 aaKnown RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 NDUFA10O95299 355 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 P4HBP07237 508 aaKnown RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 RPSAP08865 295 aaKnown RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 PDGFRBP09619 1106 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 UNC13DQ70J99 1090 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 PYROXD1Q8WU10 500 aa13.01□□□□□ -0.33
SPG11-201ENST00000261866 RBAKQ9NYW8 714 aaPredicted RBP13.01□□□□□ -0.33
SPG11-201ENST00000261866 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
SPG11-201ENST00000261866 PGBD3Q8N328 593 aa13□□□□□ -0.33
SPG11-201ENST00000261866 SAYSD1Q9NPB0 183 aa13□□□□□ -0.33
SPG11-201ENST00000261866 RCOR1Q9UKL0 485 aa13□□□□□ -0.33
SPG11-201ENST00000261866 FAM205CA6NFA0 338 aa13□□□□□ -0.33
SPG11-201ENST00000261866 RGS7P49802 495 aa13□□□□□ -0.33
SPG11-201ENST00000261866 KRT76Q01546 638 aa13□□□□□ -0.33
SPG11-201ENST00000261866 PLA2G4FQ68DD2 849 aa13□□□□□ -0.33
SPG11-201ENST00000261866 ISCA1Q9BUE6 129 aa13□□□□□ -0.33
SPG11-201ENST00000261866 MRPL4Q9BYD3 311 aaKnown RBP13□□□□□ -0.33
SPG11-201ENST00000261866 KLRK1P26718 216 aa13□□□□□ -0.33
SPG11-201ENST00000261866 LIG3P49916 1009 aa13□□□□□ -0.33
SPG11-201ENST00000261866 KCNA1Q09470 495 aa13□□□□□ -0.33
SPG11-201ENST00000261866 ITPK1Q13572 414 aa13□□□□□ -0.33
SPG11-201ENST00000261866 TAS2R42Q7RTR8 314 aa13□□□□□ -0.33
SPG11-201ENST00000261866 SRBD1Q8N5C6 995 aaKnown RBP13□□□□□ -0.33
SPG11-201ENST00000261866 UBE2Q2LH0YL09 131 aa13□□□□□ -0.33
SPG11-201ENST00000261866 PSMC1P62191 440 aaKnown RBP13□□□□□ -0.33
SPG11-201ENST00000261866 IL9RQ01113 521 aa13□□□□□ -0.33
SPG11-201ENST00000261866 KCNH2Q12809 1159 aa13□□□□□ -0.33
SPG11-201ENST00000261866 KIF19Q2TAC6 998 aa13□□□□□ -0.33
SPG11-201ENST00000261866 TRMT10CQ7L0Y3 403 aaKnown RBP13□□□□□ -0.33
SPG11-201ENST00000261866 LRRC71Q8N4P6 559 aa13□□□□□ -0.33
SPG11-201ENST00000261866 LBHD1Q9BQE6 289 aaPredicted RBP13□□□□□ -0.33
SPG11-201ENST00000261866 NUP85Q9BW27 656 aa13□□□□□ -0.33
SPG11-201ENST00000261866 JPH1Q9HDC5 661 aaPredicted RBP13□□□□□ -0.33
SPG11-201ENST00000261866 BARHL2Q9NY43 387 aa13□□□□□ -0.33
SPG11-201ENST00000261866 FLT1P17948 1338 aa13□□□□□ -0.33
SPG11-201ENST00000261866 CCL15-CCL14A0A0B4J2E2 113 aa13□□□□□ -0.33
SPG11-201ENST00000261866 TRPA1O75762 1119 aa13□□□□□ -0.33
SPG11-201ENST00000261866 APOEP02649 317 aa13□□□□□ -0.33
SPG11-201ENST00000261866 PEX19P40855 299 aa13□□□□□ -0.33
SPG11-201ENST00000261866 KCNJ6P48051 423 aa13□□□□□ -0.33
SPG11-201ENST00000261866 CCL15Q16663 113 aa13□□□□□ -0.33
SPG11-201ENST00000261866 MCPH1Q8NEM0 835 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms