RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 NACC1Q96RE7 527 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 UBE2OQ9C0C9 1292 aaKnown RBP12.88□□□□□ -0.35
PFDN1-201ENST00000261813 STXBP5LQ9Y2K9 1186 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 TANC1Q9C0D5 1861 aa12.88□□□□□ -0.35
PFDN1-201ENST00000261813 A0A0C4DFX4 3053 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 ARID2Q68CP9 1835 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 E9PMD0 336 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 TULP1O00294 542 aaPredicted RBP12.87□□□□□ -0.35
PFDN1-201ENST00000261813 SLC26A4O43511 780 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 CAND2O75155 1236 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 CSF2RAP15509 400 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 UBA7P41226 1012 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 EPHB4P54760 987 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 MGAT3Q09327 533 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 MBTPS1Q14703 1052 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 ZRSR1Q15695 479 aaKnown RBP12.87□□□□□ -0.35
PFDN1-201ENST00000261813 TMEM119Q4V9L6 283 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 AXDND1Q5T1B0 1012 aaPredicted RBP12.87□□□□□ -0.35
PFDN1-201ENST00000261813 EFCAB12Q6NXP0 572 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 TMEM199Q8N511 208 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 METTL13Q8N6R0 699 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 LRRC15Q8TF66 581 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 SYMPKQ92797 1274 aaKnown RBP12.87□□□□□ -0.35
PFDN1-201ENST00000261813 EPSTI1Q96J88 318 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 PLIN2Q99541 437 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 LBHD1Q9BQE6 289 aaPredicted RBP12.87□□□□□ -0.35
PFDN1-201ENST00000261813 OSBPL7Q9BZF2 842 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 DHX33Q9H6R0 707 aaKnown RBP12.87□□□□□ -0.35
PFDN1-201ENST00000261813 DBR1Q9UK59 544 aaKnown RBP12.87□□□□□ -0.35
PFDN1-201ENST00000261813 PPME1Q9Y570 386 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 KAT6AQ92794 2004 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 KDM3AQ9Y4C1 1321 aa12.87□□□□□ -0.35
PFDN1-201ENST00000261813 RSPH10B2B2RC85 870 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 NBNO60934 754 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 GADD45BO75293 160 aaPredicted RBP12.86□□□□□ -0.35
PFDN1-201ENST00000261813 CHRNA1P02708 482 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 RSPH10BP0C881 870 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 RFC5P40937 340 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 POLGP54098 1239 aaPredicted RBP12.86□□□□□ -0.35
PFDN1-201ENST00000261813 MRPS6P82932 125 aaKnown RBP12.86□□□□□ -0.35
PFDN1-201ENST00000261813 FPGSQ05932 587 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 FAM160A1Q05DH4 1040 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 TMEM62Q0P6H9 643 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 EMC2Q15006 297 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 KARSQ15046 597 aaKnown RBP12.86□□□□□ -0.35
PFDN1-201ENST00000261813 FAM26DQ5JW98 314 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 RESP18Q5W5W9 173 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 FSIP1Q8NA03 581 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 CCSER1Q9C0I3 900 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 BHMT2Q9H2M3 363 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 SUGCTQ9HAC7 445 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 XPNPEP1Q9NQW7 623 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 USP25Q9UHP3 1055 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 ADGRG1Q9Y653 693 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 COL6A3P12111 3177 aa12.86□□□□□ -0.35
PFDN1-201ENST00000261813 SIP14410 1827 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 FAM237AA0A1B0GTK4 181 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 LETM1O95202 739 aaPredicted RBP12.85□□□□□ -0.35
PFDN1-201ENST00000261813 EYA4O95677 639 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 VTNP04004 478 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 SHC4Q6S5L8 630 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 Q7L0L9 218 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 C16orf59Q7L2K0 433 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 NME8Q8N427 588 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 SLC7A3Q8WY07 619 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 CDK5RAP3Q96JB5 506 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 CCDC43Q96MW1 224 aaKnown RBP12.85□□□□□ -0.35
PFDN1-201ENST00000261813 PPP1R16BQ96T49 567 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 HOOK1Q9UJC3 728 aaKnown RBP12.85□□□□□ -0.35
PFDN1-201ENST00000261813 DNM3Q9UQ16 869 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 TRPV2Q9Y5S1 764 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 CDY2AQ9Y6F7 541 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 LAMA3Q16787 3333 aa12.85□□□□□ -0.35
PFDN1-201ENST00000261813 SCN5AQ14524 2016 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 ARHGEF35A5YM69 484 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 USO1O60763 962 aaKnown RBP12.84□□□□□ -0.35
PFDN1-201ENST00000261813 KINO60870 393 aaKnown RBP12.84□□□□□ -0.35
PFDN1-201ENST00000261813 GPR32O75388 356 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 DGAT1O75907 488 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 RPLP2P05387 115 aaKnown RBP12.84□□□□□ -0.35
PFDN1-201ENST00000261813 ACRP10323 421 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 PLCG1P19174 1290 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 TMOD1P28289 359 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 RFC2P35250 354 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 PPIGQ13427 754 aaKnown RBP eCLIP12.84□□□□□ -0.35
PFDN1-201ENST00000261813 KANK3Q6NY19 840 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 DEFB128Q7Z7B8 93 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 KCTD17Q8N5Z5 321 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 TMEM143Q96AN5 459 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 CALML4Q96GE6 196 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 TIGD1Q96MW7 591 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 MAP7D2Q96T17 732 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 MTRQ99707 1265 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 JPH2Q9BR39 696 aaPredicted RBP12.84□□□□□ -0.35
PFDN1-201ENST00000261813 CELF4Q9BZC1 486 aaKnown RBP12.84□□□□□ -0.35
PFDN1-201ENST00000261813 ATP6V0A4Q9HBG4 840 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms