RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 KRT76Q01546 638 aa8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 GEN1Q17RS7 908 aa8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 WLSQ5T9L3 541 aa8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 ACAD11Q709F0 780 aa8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 NOA1Q8NC60 698 aaKnown RBP8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 PI4K2BQ8TCG2 481 aa8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 XAGE3Q8WTP9 111 aa8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 SNRNP27Q8WVK2 155 aaKnown RBP8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 ZWILCHQ9H900 591 aa8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 PANK4Q9NVE7 773 aa8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 R3HDM2Q9Y2K5 976 aaKnown RBP8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 SESN1Q9Y6P5 492 aa8.89□□□□□ -0.99
SNCAIP-201ENST00000261367 PLEKHG1Q9ULL1 1385 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 USP42Q9H9J4 1324 aaKnown RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 KPNA7A9QM74 516 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 P4HA2O15460 535 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 TRAPPC3O43617 180 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 ABCB4P21439 1286 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 MFAP3P55082 362 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 PTGDRQ13258 359 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 BLMHQ13867 455 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 KIAA1755Q5JYT7 1200 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 RINT1Q6NUQ1 792 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 SLFN12Q8IYM2 578 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 PDIK1LQ8N165 341 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 RFWD2Q8NHY2 731 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 ING2Q9H160 280 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 RAD21L1Q9H4I0 556 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 RNPEPL1Q9HAU8 725 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 CYP39A1Q9NYL5 469 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 WARS2Q9UGM6 360 aaKnown RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 CEP170BQ9Y4F5 1589 aaPredicted RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 USP31Q70CQ4 1352 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 BTBD18B2RXH4 712 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 SUPT3HO75486 399 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 UBTFL6P0CB48 400 aaPredicted RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 RXRAP19793 462 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 TNNI2P48788 182 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 CYP27A1Q02318 531 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 XRCC4Q13426 336 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 GJC2Q5T442 439 aaPredicted RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 TRIM65Q6PJ69 517 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 FAM47EQ6ZV65 393 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 IFNL2Q8IZJ0 200 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 TTC13Q8NBP0 860 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 KIFC2Q96AC6 838 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 AP1M1Q9BXS5 423 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 KLHL4Q9C0H6 718 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 HDAC6Q9UBN7 1215 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 RSL24D1Q9UHA3 163 aaKnown RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 CFAP69A5D8W1 941 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 GOLGA8TH3BQL2 631 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 TNFAIP8O95379 198 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 GOLGA8HP0CJ92 632 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 CA8P35219 290 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 ADCY7P51828 1080 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 TMPRSS15P98073 1019 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 MRPL28Q13084 256 aaKnown RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 RCN1Q15293 331 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 RABGAP1LQ5R372 815 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 APOA5Q6Q788 366 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 GALNT15Q8N3T1 639 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 NBPF15Q8N660 670 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 DBNDD2Q9BQY9 259 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 FHDC1Q9C0D6 1143 aaPredicted RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 TRPV6Q9H1D0 765 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 PVALEFA0A1B0GWK0 134 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 TTC26A0AVF1 554 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 CYTH3O43739 400 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 KRT6CP48668 564 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 YWHAGP61981 247 aaKnown RBP eCLIP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 EP400NLQ6ZTU2 488 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 THEMISQ8N1K5 641 aaPredicted RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 RIN2Q8WYP3 895 aaPredicted RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 MPP4Q96JB8 637 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 VPS50Q96JG6 964 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 FNBP1Q96RU3 617 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 PLIN2Q99541 437 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 COQ7Q99807 217 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 UBAP1Q9NZ09 502 aa8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 TRMT112Q9UI30 125 aaKnown RBP8.88□□□□□ -0.99
SNCAIP-201ENST00000261367 SAC3D1A6NKF1 404 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 CYP21A2P08686 494 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 POLR2BP30876 1174 aaKnown RBP8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 HSD17B3P37058 310 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 PDAP1Q13442 181 aaKnown RBP8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 JADE1Q6IE81 842 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 SIX6OS1Q8N1H7 587 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 CNPY3Q9BT09 278 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 SH3GLB2Q9NR46 395 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 STX18Q9P2W9 335 aaKnown RBP8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 SNX24Q9Y343 169 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 GMEB1Q9Y692 573 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 USP6P35125 1406 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 FAM208AQ9UK61 1670 aaKnown RBP8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 PALM3A6NDB9 673 aaPredicted RBP8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 H0YCG3 227 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 PHF2O75151 1096 aa8.87□□□□□ -0.99
SNCAIP-201ENST00000261367 MBD4O95243 580 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms