RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 KIAA0895Q8NCT3 520 aa17.21■□□□□ 0.35
GYPC-201ENST00000259254 DEPTORQ8TB45 409 aa17.21■□□□□ 0.35
GYPC-201ENST00000259254 BSNDQ8WZ55 320 aa17.21■□□□□ 0.35
GYPC-201ENST00000259254 NAT10Q9H0A0 1025 aaKnown RBP17.21■□□□□ 0.35
GYPC-201ENST00000259254 C17orf75Q9HAS0 396 aa17.21■□□□□ 0.35
GYPC-201ENST00000259254 KMT5AQ9NQR1 393 aa17.21■□□□□ 0.35
GYPC-201ENST00000259254 OLFML3Q9NRN5 406 aa17.21■□□□□ 0.35
GYPC-201ENST00000259254 KCNG1Q9UIX4 513 aa17.21■□□□□ 0.35
GYPC-201ENST00000259254 NOD1Q9Y239 953 aa17.21■□□□□ 0.35
GYPC-201ENST00000259254 A0A0U1RQG5 324 aaPredicted RBP17.2■□□□□ 0.34
GYPC-201ENST00000259254 SLC16A4O15374 487 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 TREHO43280 583 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 KIF20AO95235 890 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 MYBP10242 640 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 GLRA2P23416 452 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 NPTX2P47972 431 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 LAMTOR4Q0VGL1 99 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 MKRN4PQ13434 485 aaPredicted RBP17.2■□□□□ 0.34
GYPC-201ENST00000259254 TFDP1Q14186 410 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 HIC1Q14526 733 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
GYPC-201ENST00000259254 MYOCDQ8IZQ8 938 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 GLIS3Q8NEA6 775 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 NLRP4Q96MN2 994 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 FGFBP2Q9BYJ0 223 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 PRO3102Q9H379 93 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 PCDHA2Q9Y5H9 948 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 GRIN2DO15399 1336 aa17.2■□□□□ 0.34
GYPC-201ENST00000259254 SMIM35A0A1B0GVV1 85 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 MBLAC1A4D2B0 266 aaPredicted RBP17.19■□□□□ 0.34
GYPC-201ENST00000259254 PSMA7O14818 248 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 SRGAP2CP0DJJ0 459 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 PPP1R2P41236 205 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 PRCPP42785 496 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 NAMPTP43490 491 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 PTPN11Q06124 597 aaPredicted RBP17.19■□□□□ 0.34
GYPC-201ENST00000259254 CAPSQ13938 189 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 GDF6Q6KF10 455 aaPredicted RBP17.19■□□□□ 0.34
GYPC-201ENST00000259254 RUFY4Q6ZNE9 571 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 SESTD1Q86VW0 696 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 KSR1Q8IVT5 923 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 NELFCDQ8IXH7 590 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 SLC17A8Q8NDX2 589 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 SPIRE2Q8WWL2 714 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 ZNF668Q96K58 619 aaPredicted RBP17.19■□□□□ 0.34
GYPC-201ENST00000259254 PPP1R16BQ96T49 567 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 KIFC3Q9BVG8 833 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 CTNND2Q9UQB3 1225 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 PCDHB13Q9Y5F0 798 aa17.19■□□□□ 0.34
GYPC-201ENST00000259254 PPP1R3GB7ZBB8 358 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 H0YCG3 227 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 ASAP2O43150 1006 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 PRPF6O94906 941 aaKnown RBP17.18■□□□□ 0.34
GYPC-201ENST00000259254 VTNP04004 478 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 MAPTP10636 758 aaKnown RBP17.18■□□□□ 0.34
GYPC-201ENST00000259254 CD44P16070 742 aaKnown RBP17.18■□□□□ 0.34
GYPC-201ENST00000259254 HOXC8P31273 242 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 FXR1P51114 621 aaKnown RBP eCLIP17.18■□□□□ 0.34
GYPC-201ENST00000259254 CASP5P51878 434 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 NCKAP1LP55160 1127 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 ADAM17P78536 824 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 ALCAMQ13740 583 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 PTGISQ16647 500 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 LRRC26Q2I0M4 334 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 ZC2HC1CQ53FD0 456 aaPredicted RBP17.18■□□□□ 0.34
GYPC-201ENST00000259254 ZNF720Q7Z2F6 126 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 HAUS6Q7Z4H7 955 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 KIAA0319LQ8IZA0 1049 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 ADSSL1Q8N142 457 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 GUF1Q8N442 669 aaKnown RBP17.18■□□□□ 0.34
GYPC-201ENST00000259254 LINC01465Q8N7H1 131 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 RNF149Q8NC42 400 aa17.18■□□□□ 0.34
GYPC-201ENST00000259254 SENP6Q9GZR1 1112 aaPredicted RBP17.18■□□□□ 0.34
GYPC-201ENST00000259254 DENND3A2RUS2 1198 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 CAVIN2O95810 425 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 ZNF165P49910 485 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 STX17P56962 302 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 TMEM62Q0P6H9 643 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 PAK1Q13153 545 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 TAF2Q6P1X5 1199 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 ZBTB8OSQ8IWT0 167 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 RNF214Q8ND24 703 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 DNAJB3Q8WWF6 145 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 NELFBQ8WX92 580 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 NLRP7Q8WX94 980 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 FIZ1Q96SL8 496 aa17.17■□□□□ 0.34
GYPC-201ENST00000259254 ZMYND8Q9ULU4 1186 aaPredicted RBP17.17■□□□□ 0.34
GYPC-201ENST00000259254 TRIOBPQ9H2D6 2365 aa17.16■□□□□ 0.34
GYPC-201ENST00000259254 ARVCFO00192 962 aa17.16■□□□□ 0.34
GYPC-201ENST00000259254 EIF3DO15371 548 aaKnown RBP eCLIP17.16■□□□□ 0.34
GYPC-201ENST00000259254 PHKA2P46019 1235 aa17.16■□□□□ 0.34
GYPC-201ENST00000259254 COBLL1Q53SF7 1204 aa17.16■□□□□ 0.34
GYPC-201ENST00000259254 EPM2AIP1Q7L775 607 aaPredicted RBP17.16■□□□□ 0.34
GYPC-201ENST00000259254 RSPH3Q86UC2 560 aa17.16■□□□□ 0.34
GYPC-201ENST00000259254 SYCP3Q8IZU3 236 aa17.16■□□□□ 0.34
GYPC-201ENST00000259254 TMEM161BQ8NDZ6 487 aa17.16■□□□□ 0.34
GYPC-201ENST00000259254 SCFD1Q8WVM8 642 aa17.16■□□□□ 0.34
GYPC-201ENST00000259254 DHTKD1Q96HY7 919 aaPredicted RBP17.16■□□□□ 0.34
GYPC-201ENST00000259254 ACCSQ96QU6 501 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms