RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 IFIT5Q13325 482 aaKnown RBP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 LRP8Q14114 963 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 TTC22Q5TAA0 569 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 CATSPER3Q86XQ3 398 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 CABLES1Q8TDN4 633 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 RBMX2Q9Y388 322 aaKnown RBP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 PITPNM2Q9BZ72 1349 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 GYG2O15488 501 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 FOSL2P15408 326 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 MAGEA10P43363 369 aaPredicted RBP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 DSG1Q02413 1049 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 KIFC2Q96AC6 838 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 DESI2Q9BSY9 194 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 EDEM3Q9BZQ6 932 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 SLC5A4Q9NY91 659 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 CYTH4Q9UIA0 394 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 PIK3C2BO00750 1634 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 ANGPT2O15123 496 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 SGTAO43765 313 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 ACAT1P24752 427 aaKnown RBP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 GRK2P25098 689 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 AARSP49588 968 aaKnown RBP eCLIP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 DSTNP60981 165 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 HAND2P61296 217 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 ZMYM1Q5SVZ6 1142 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 LVRNQ6Q4G3 990 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 RNF19BQ6ZMZ0 732 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 GALNT7Q86SF2 657 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 PM20D2Q8IYS1 436 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 SPARTQ8N0X7 666 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 TSPYL6Q8N831 410 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 PIGOQ8TEQ8 1089 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 ZFPM2Q8WW38 1151 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 LRGUKQ96M69 825 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 PLEKHF1Q96S99 279 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 DCLRE1BQ9H816 532 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 KIF17Q9P2E2 1029 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 MBD2Q9UBB5 411 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 TRMT112Q9UI30 125 aaKnown RBP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 KLHL20Q9Y2M5 609 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 FOXN3O00409 490 aaPredicted RBP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 ZMYND10O75800 440 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 PDE4BQ07343 736 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 ZC2HC1CQ53FD0 456 aaPredicted RBP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 C10orf62Q5T681 223 aaPredicted RBP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 PLEKHA7Q6IQ23 1121 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 KCNV1Q6PIU1 500 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 MARK2Q7KZI7 788 aaKnown RBP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 KRT74Q7RTS7 529 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 ARL6IP6Q8N6S5 226 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 KCNG4Q8TDN1 519 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 FAM149B1Q96BN6 582 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 SNF8Q96H20 258 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 PSKH2Q96QS6 385 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 NOL6Q9H6R4 1146 aaKnown RBP7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 TMEM94Q12767 1356 aa7.19□□□□□ -1.26
PDGFRA-201ENST00000257290 ZSCAN5BA6NJL1 495 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 RPL17P18621 184 aaKnown RBP7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 SOX5P35711 763 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 CASP5P51878 434 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 USP14P54578 494 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 CTTNQ14247 550 aaKnown RBP7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 PPP2R5BQ15173 497 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 TRMT10CQ7L0Y3 403 aaKnown RBP7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 CABP7Q86V35 215 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 CCDC28AQ8IWP9 274 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 PDGFDQ9GZP0 370 aaPredicted RBP7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 GMIPQ9P107 970 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 L1RE1Q9UN81 338 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 I3L4J1 428 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 TMCC2O75069 709 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 CLPTM1O96005 669 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 CLUP10909 449 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 VAV1P15498 845 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 HALP42357 657 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 GSTA3Q16772 222 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 ADCK5Q3MIX3 580 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 KDM7AQ6ZMT4 941 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 RFX8Q6ZV50 586 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 SH3BP5LQ7L8J4 393 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 SPICE1Q8N0Z3 855 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 ZFRQ96KR1 1074 aaKnown RBP7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 PRM3Q9NNZ6 103 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 C2orf81A6NN90 581 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 UBAP1LF5GYI3 381 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 ACSL4O60488 711 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 ASMTLO95671 621 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 EEF1B2P24534 225 aaKnown RBP7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 SYKP43405 635 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 CCR3P51677 355 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 CDCA2Q69YH5 1023 aaPredicted RBP7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 GRPEL2Q8TAA5 225 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 EME1Q96AY2 570 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 SNX27Q96L92 541 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 EFHD1Q9BUP0 239 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 SMCO2A6NFE2 343 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 RAD51BO15315 384 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 IFNA14P01570 189 aa7.18□□□□□ -1.26
PDGFRA-201ENST00000257290 ITGA2BP08514 1039 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms