RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 DCAF4Q8WV16 495 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 CCDC17Q96LX7 622 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 AIPL1Q9NZN9 384 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 DNM3Q9UQ16 869 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 C10orf71Q711Q0 1435 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 UCHL3P15374 230 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 VCAM1P19320 739 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 RRP1BQ14684 758 aaKnown RBP12.26□□□□□ -0.45
PDE6B-201ENST00000255622 PUS10Q3MIT2 529 aaKnown RBP12.26□□□□□ -0.45
PDE6B-201ENST00000255622 MEI1Q5TIA1 1274 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 IRF2BP2Q7Z5L9 587 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 NEK9Q8TD19 979 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 ARL8AQ96BM9 186 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 ZDHHC15Q96MV8 337 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 AMNQ9BXJ7 453 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 EPB41L5Q9HCM4 733 aa12.26□□□□□ -0.45
PDE6B-201ENST00000255622 PAPOLBQ9NRJ5 636 aaKnown RBP12.26□□□□□ -0.45
PDE6B-201ENST00000255622 ARMCX3Q9UH62 379 aaPredicted RBP12.26□□□□□ -0.45
PDE6B-201ENST00000255622 ASTN1O14525 1302 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 GOLGA6L10A6NI86 522 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 CHMP2AO43633 222 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 HEXIM1O94992 359 aaKnown RBP12.25□□□□□ -0.45
PDE6B-201ENST00000255622 PON1P27169 355 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 RPA1P27694 616 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 GUCY2FP51841 1108 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 EPHB4P54760 987 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 UBXN2AP68543 259 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 EDRF1Q3B7T1 1238 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 FBXO11Q86XK2 927 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 SYT2Q8N9I0 419 aaPredicted RBP12.25□□□□□ -0.45
PDE6B-201ENST00000255622 FAM76AQ8TAV0 307 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 CTNNBL1Q8WYA6 563 aaPredicted RBP12.25□□□□□ -0.45
PDE6B-201ENST00000255622 SPAG5Q96R06 1193 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 PI4KBQ9UBF8 816 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 PCDHGC5Q9Y5F6 944 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 GCNT3O95395 438 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 KRT14P02533 472 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 GNAT1P11488 350 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 SESN3P58005 492 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 CTTNQ14247 550 aaKnown RBP12.25□□□□□ -0.45
PDE6B-201ENST00000255622 TTMPQ5BVD1 217 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 NAP1L4Q99733 375 aaKnown RBP12.25□□□□□ -0.45
PDE6B-201ENST00000255622 NYAP2Q9P242 653 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 VAV3Q9UKW4 847 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 SCN9AQ15858 1988 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 PITPNM2Q9BZ72 1349 aa12.25□□□□□ -0.45
PDE6B-201ENST00000255622 SMIM24O75264 130 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 GH2P01242 217 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 AFPP02771 609 aaKnown RBP12.24□□□□□ -0.45
PDE6B-201ENST00000255622 COL11A2P13942 1736 aaPredicted RBP12.24□□□□□ -0.45
PDE6B-201ENST00000255622 NPR1P16066 1061 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 AP3B2Q13367 1082 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 Q4G0T1 1027 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 KCTD16Q68DU8 428 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 EPM2AIP1Q7L775 607 aaPredicted RBP12.24□□□□□ -0.45
PDE6B-201ENST00000255622 KLHL7Q8IXQ5 586 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 SH2D3CQ8N5H7 860 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 PCDHB13Q9Y5F0 798 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 A0A1W2PRG0 241 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 TESPA1A2RU30 521 aaPredicted RBP12.24□□□□□ -0.45
PDE6B-201ENST00000255622 XRCC5P13010 732 aaKnown RBP12.24□□□□□ -0.45
PDE6B-201ENST00000255622 CNGA1P29973 690 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 EXOC3L4Q17RC7 722 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 ABCB5Q2M3G0 1257 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 ZC2HC1CQ53FD0 456 aaPredicted RBP12.24□□□□□ -0.45
PDE6B-201ENST00000255622 INPP4AQ96PE3 977 aaPredicted RBP12.24□□□□□ -0.45
PDE6B-201ENST00000255622 ZIM3Q96PE6 472 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 TDRD3Q9H7E2 651 aaKnown RBP12.24□□□□□ -0.45
PDE6B-201ENST00000255622 PNMA2Q9UL42 364 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 TRAF3IP3Q9Y228 551 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 ATAD5Q96QE3 1844 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 KCNK3O14649 394 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 KRT38O76015 456 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 NR3C1P04150 777 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 SREBF1P36956 1147 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 CLCN2P51788 898 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 COG2Q14746 738 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 SLC27A3Q5K4L6 730 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 SYDE2Q5VT97 1194 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 ERMNQ8TAM6 284 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 WHAMMQ8TF30 809 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 TBC1D31Q96DN5 1066 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 RBM41Q96IZ5 413 aaKnown RBP12.24□□□□□ -0.45
PDE6B-201ENST00000255622 TSC22D3Q99576 134 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 EIF2AK1Q9BQI3 630 aaKnown RBP12.24□□□□□ -0.45
PDE6B-201ENST00000255622 HOMER3Q9NSC5 361 aa12.24□□□□□ -0.45
PDE6B-201ENST00000255622 UTP6Q9NYH9 597 aaKnown RBP12.24□□□□□ -0.45
PDE6B-201ENST00000255622 MYCLP1P12525 358 aaPredicted RBP12.23□□□□□ -0.45
PDE6B-201ENST00000255622 NMT1P30419 496 aaKnown RBP12.23□□□□□ -0.45
PDE6B-201ENST00000255622 ZNF76P36508 570 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 WLSQ5T9L3 541 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 CWF19L1Q69YN2 538 aaKnown RBP12.23□□□□□ -0.45
PDE6B-201ENST00000255622 TATDN1Q6P1N9 297 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 COL23A1Q86Y22 540 aaPredicted RBP12.23□□□□□ -0.45
PDE6B-201ENST00000255622 DYDC1Q8WWB3 177 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 CASKIN2Q8WXE0 1202 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 CCDC43Q96MW1 224 aaKnown RBP12.23□□□□□ -0.45
PDE6B-201ENST00000255622 GLT8D2Q9H1C3 349 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms