RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 FOSP01100 380 aaPredicted RBP10.01□□□□□ -0.81
RPA1-201ENST00000254719 ITGA4P13612 1032 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 CHRNB2P17787 502 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 TCP1P17987 556 aaKnown RBP10.01□□□□□ -0.81
RPA1-201ENST00000254719 TNFRSF8P28908 595 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 CARSP49589 748 aaKnown RBP10.01□□□□□ -0.81
RPA1-201ENST00000254719 PPP2R5EQ16537 467 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 CFAP58Q5T655 872 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 SLFN12Q8IYM2 578 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 MTMR14Q8NCE2 650 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 KAT5Q92993 513 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 CEP63Q96MT8 703 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 ADAMTS1Q9UHI8 967 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 JRKLQ9Y4A0 524 aa10.01□□□□□ -0.81
RPA1-201ENST00000254719 SIX1Q15475 284 aaPredicted RBP10□□□□□ -0.81
RPA1-201ENST00000254719 DLK2Q6UY11 383 aa10□□□□□ -0.81
RPA1-201ENST00000254719 CCDC26Q8TAB7 109 aa10□□□□□ -0.81
RPA1-201ENST00000254719 MPHOSPH6Q99547 160 aaKnown RBP10□□□□□ -0.81
RPA1-201ENST00000254719 DNM3Q9UQ16 869 aa10□□□□□ -0.81
RPA1-201ENST00000254719 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10□□□□□ -0.81
RPA1-201ENST00000254719 CLRN2A0PK11 232 aa10□□□□□ -0.81
RPA1-201ENST00000254719 WNT10BO00744 389 aa10□□□□□ -0.81
RPA1-201ENST00000254719 PEX10O60683 326 aa10□□□□□ -0.81
RPA1-201ENST00000254719 GBP2P32456 591 aaPredicted RBP10□□□□□ -0.81
RPA1-201ENST00000254719 POLR2FP61218 127 aaKnown RBP10□□□□□ -0.81
RPA1-201ENST00000254719 ABCB5Q2M3G0 1257 aa10□□□□□ -0.81
RPA1-201ENST00000254719 DYDC2Q96IM9 177 aa10□□□□□ -0.81
RPA1-201ENST00000254719 IFIH1Q9BYX4 1025 aaKnown RBP10□□□□□ -0.81
RPA1-201ENST00000254719 ZBTB21Q9ULJ3 1066 aa10□□□□□ -0.81
RPA1-201ENST00000254719 SAMM50Q9Y512 469 aa10□□□□□ -0.81
RPA1-201ENST00000254719 ESYT3A0FGR9 886 aa10□□□□□ -0.81
RPA1-201ENST00000254719 PLA2G6O60733 806 aa10□□□□□ -0.81
RPA1-201ENST00000254719 APBA3O96018 575 aa10□□□□□ -0.81
RPA1-201ENST00000254719 PPP3CAQ08209 521 aa10□□□□□ -0.81
RPA1-201ENST00000254719 EMC10Q5UCC4 262 aa10□□□□□ -0.81
RPA1-201ENST00000254719 IFT20Q8IY31 132 aa10□□□□□ -0.81
RPA1-201ENST00000254719 VTI1AQ96AJ9 217 aa10□□□□□ -0.81
RPA1-201ENST00000254719 ZNF219Q9P2Y4 722 aaPredicted RBP10□□□□□ -0.81
RPA1-201ENST00000254719 FRMD4BQ9Y2L6 1034 aa10□□□□□ -0.81
RPA1-201ENST00000254719 CLIC2O15247 247 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 TBC1D12O60347 775 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 AP3B2Q13367 1082 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 ENOX2Q16206 610 aaKnown RBP9.99□□□□□ -0.81
RPA1-201ENST00000254719 ASIC2Q16515 512 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 MAATS1Q7Z4T9 603 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 SYCE1Q8N0S2 351 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 PCDHB18PQ96TA0 734 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 METTL14Q9HCE5 456 aaKnown RBP9.99□□□□□ -0.81
RPA1-201ENST00000254719 USP20Q9Y2K6 914 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 FLOT1O75955 427 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 ERVK-9P63128 1117 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 ARHGAP27Q6ZUM4 889 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 MIGA2Q7L4E1 593 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 RASGEF1CQ8N431 466 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 FAM76AQ8TAV0 307 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 CASKIN2Q8WXE0 1202 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 BSNDQ8WZ55 320 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 DDX1Q92499 740 aaKnown RBP9.99□□□□□ -0.81
RPA1-201ENST00000254719 SEMA4DQ92854 862 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 HES6Q96HZ4 224 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 MED4Q9NPJ6 270 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 DCDC2CA8MYV0 355 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 EVI5O60447 810 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 FTCDO95954 541 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 CALCAP01258 141 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 SPRED3Q2MJR0 410 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 RSBN1LQ6PCB5 846 aaPredicted RBP9.99□□□□□ -0.81
RPA1-201ENST00000254719 CEP128Q6ZU80 1094 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 CD101Q93033 1021 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 CSRNP1Q96S65 589 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 SGIP1Q9BQI5 828 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 EDEM3Q9BZQ6 932 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 RNF14Q9UBS8 474 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 PPP1R9AQ9ULJ8 1098 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 PTPRJQ12913 1337 aa9.99□□□□□ -0.81
RPA1-201ENST00000254719 F8VZ95 297 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 NFKBIEO00221 500 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 MEFVO15553 781 aaPredicted RBP9.98□□□□□ -0.81
RPA1-201ENST00000254719 BMP3P12645 472 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 ATP4AP20648 1035 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 ADAM9Q13443 819 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 CFAP221Q4G0U5 840 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 HERC4Q5GLZ8 1057 aaPredicted RBP9.98□□□□□ -0.81
RPA1-201ENST00000254719 SFMBT2Q5VUG0 894 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 GOLGA5Q8TBA6 731 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 ALG3Q92685 438 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 LRRC45Q96CN5 670 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 VIPAS39Q9H9C1 493 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 ZNF277Q9NRM2 450 aaPredicted RBP9.98□□□□□ -0.81
RPA1-201ENST00000254719 EYA4O95677 639 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 MATR3P43243 847 aaKnown RBP eCLIP9.98□□□□□ -0.812e-6■■□□□ 12.3
RPA1-201ENST00000254719 ZRSR2Q15696 482 aaKnown RBP9.98□□□□□ -0.81
RPA1-201ENST00000254719 ICE2Q659A1 982 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 FRMD5Q7Z6J6 570 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 NT5DC3Q86UY8 548 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 ARHGEF19Q8IW93 802 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 TMEM130Q8N3G9 435 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 IWS1Q96ST2 819 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 LSM14BQ9BX40 385 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms