RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ADGRL3Q9HAR2 1447 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 USP17L12C9JPN9 530 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 USP17L21D6R901 530 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 GAS7O60861 476 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 DMPKQ09013 629 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 ZBTB18Q99592 522 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 PARVGQ9HBI0 331 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 CAB39Q9Y376 341 aaPredicted RBP14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 HEG1Q9ULI3 1381 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 LRRN2O75325 713 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 SEC24DO94855 1032 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 GTF2IP78347 998 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 MFSD4BQ5TF39 518 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 KIAA0825Q8IV33 1275 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 LARGE2Q8N3Y3 721 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 NCLNQ969V3 563 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 CFAP36Q96G28 342 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 MTRQ99707 1265 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 RNF26Q9BY78 433 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 K7ENM7 598 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 ATP1A1P05023 1023 aaKnown RBP14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 KITP10721 976 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 ST13P50502 369 aaKnown RBP14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 COPS2P61201 443 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 KDSRQ06136 332 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 STAT4Q14765 748 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 MAPRE2Q15555 327 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 GCNT4Q9P109 453 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 GJA3Q9Y6H8 435 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 CROCC2H7BZ55 1655 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 WDR64B1ANS9 1081 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 DLATP10515 647 aaKnown RBP14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 SLC1A4P43007 532 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 CCZ1BP86790 482 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 CCZ1P86791 482 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 TFAP4Q01664 338 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 DHX34Q14147 1143 aaKnown RBP14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 MCM8Q9UJA3 840 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 SNX12Q9UMY4 172 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 ADGRB3O60242 1522 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 PITPNM2Q9BZ72 1349 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 RXRBP28702 533 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 HSPA13P48723 471 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 TCP10Q12799 353 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 MFSD14BQ5SR56 506 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 NANOGNBQ7Z5D8 188 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 CMTR1Q8N1G2 835 aaKnown RBP14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 PAGE5Q96GU1 130 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 VPS39Q96JC1 886 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 ADNPQ9H2P0 1102 aa14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 ARPP21Q9UBL0 812 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA3-201ENST00000253812 E9PCH4 1651 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 CAPN9O14815 690 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 LPXNO60711 386 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 ZNF189O75820 626 aaPredicted RBP14□□□□□ -0.17
PCDHGA3-201ENST00000253812 FGAP02671 866 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 ATP6V1B1P15313 513 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 YARSP54577 528 aaKnown RBP14□□□□□ -0.17
PCDHGA3-201ENST00000253812 TSPY1Q01534 308 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 FAM47AQ5JRC9 791 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 EXOC8Q8IYI6 725 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 SDR42E1Q8WUS8 393 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 MRPS26Q9BYN8 205 aaKnown RBP14□□□□□ -0.17
PCDHGA3-201ENST00000253812 MLXIPQ9HAP2 919 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 BTBD7Q9P203 1132 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 RASSF9O75901 435 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 TAC1P20366 129 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 CCDC103Q8IW40 242 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 BRD8Q9H0E9 1235 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 SEC31BQ9NQW1 1179 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 TNKSO95271 1327 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 MADDQ8WXG6 1647 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 ZNF839A8K0R7 811 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 H2AFXP16104 143 aaPredicted RBP14□□□□□ -0.17
PCDHGA3-201ENST00000253812 PPARAQ07869 468 aa14□□□□□ -0.17
PCDHGA3-201ENST00000253812 THOC5Q13769 683 aaKnown RBP14□□□□□ -0.17
PCDHGA3-201ENST00000253812 ZSCAN10Q96SZ4 725 aaPredicted RBP14□□□□□ -0.17
PCDHGA3-201ENST00000253812 SETD1BQ9UPS6 1966 aaKnown RBP14□□□□□ -0.17
PCDHGA3-201ENST00000253812 NFIBO00712 420 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 CDH16O75309 829 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 TJP3O95049 919 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 ZNF772Q68DY9 489 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 FAM196AQ6ZSG2 479 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 CCPG1Q9ULG6 757 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 SESN1Q9Y6P5 492 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 GOLGA8IPA6NC78 632 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 DYNLT1P63172 113 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 RUNX1T1Q06455 604 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 DNAJC24Q6P3W2 148 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 IFNL3Q8IZI9 196 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 MMS19Q96T76 1030 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 CALN1Q9BXU9 219 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 DDX39AO00148 427 aaKnown RBP13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 SKAP2O75563 359 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 ENO1P06733 434 aaKnown RBP13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 NQO1P15559 274 aaKnown RBP13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 VCAM1P19320 739 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 LIG4P49917 911 aa13.99□□□□□ -0.17
PCDHGA3-201ENST00000253812 DSG1Q02413 1049 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms