RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 POTEGQ6S5H5 508 aa25.58■■□□□ 1.69
LSM4-201ENST00000252816 ERMNQ8TAM6 284 aa25.58■■□□□ 1.69
LSM4-201ENST00000252816 ELAC1Q9H777 363 aaKnown RBP25.58■■□□□ 1.69
LSM4-201ENST00000252816 C5orf67F2Z3F1 127 aa25.57■■□□□ 1.68
LSM4-201ENST00000252816 DGAT1O75907 488 aa25.57■■□□□ 1.68
LSM4-201ENST00000252816 FGFR1P11362 822 aa25.57■■□□□ 1.68
LSM4-201ENST00000252816 SFPQP23246 707 aaKnown RBP eCLIP25.57■■□□□ 1.68
LSM4-201ENST00000252816 ECM1Q16610 540 aa25.57■■□□□ 1.68
LSM4-201ENST00000252816 RILPL1Q5EBL4 403 aa25.57■■□□□ 1.68
LSM4-201ENST00000252816 ECHDC2Q86YB7 292 aa25.57■■□□□ 1.68
LSM4-201ENST00000252816 CCDC43Q96MW1 224 aaKnown RBP25.57■■□□□ 1.68
LSM4-201ENST00000252816 INO80BQ9C086 356 aaPredicted RBP25.57■■□□□ 1.68
LSM4-201ENST00000252816 MINDY3Q9H8M7 445 aa25.57■■□□□ 1.68
LSM4-201ENST00000252816 ATP6V0A4Q9HBG4 840 aa25.57■■□□□ 1.68
LSM4-201ENST00000252816 RNF19AQ9NV58 838 aa25.57■■□□□ 1.68
LSM4-201ENST00000252816 RNF216Q9NWF9 866 aaPredicted RBP25.57■■□□□ 1.68
LSM4-201ENST00000252816 RALGAPA2Q2PPJ7 1873 aa25.57■■□□□ 1.68
LSM4-201ENST00000252816 IGSF22Q8N9C0 903 aa25.56■■□□□ 1.68
LSM4-201ENST00000252816 RNF149Q8NC42 400 aa25.56■■□□□ 1.68
LSM4-201ENST00000252816 NACC1Q96RE7 527 aa25.56■■□□□ 1.68
LSM4-201ENST00000252816 LRWD1Q9UFC0 647 aa25.56■■□□□ 1.68
LSM4-201ENST00000252816 DBR1Q9UK59 544 aaKnown RBP25.56■■□□□ 1.68
LSM4-201ENST00000252816 RWDD3Q9Y3V2 267 aa25.56■■□□□ 1.68
LSM4-201ENST00000252816 VCANP13611 3396 aa25.56■■□□□ 1.68
LSM4-201ENST00000252816 SPTBN5Q9NRC6 3674 aaKnown RBP25.56■■□□□ 1.68
LSM4-201ENST00000252816 XIRP2A4UGR9 3374 aa25.55■■□□□ 1.68
LSM4-201ENST00000252816 A0A0U1RQF3 1178 aa25.55■■□□□ 1.68
LSM4-201ENST00000252816 TBKBP1A7MCY6 615 aa25.55■■□□□ 1.68
LSM4-201ENST00000252816 ASAP2O43150 1006 aa25.55■■□□□ 1.68
LSM4-201ENST00000252816 USO1O60763 962 aaKnown RBP25.55■■□□□ 1.68
LSM4-201ENST00000252816 RB1P06400 928 aa25.55■■□□□ 1.68
LSM4-201ENST00000252816 ARL2P36404 184 aa25.55■■□□□ 1.68
LSM4-201ENST00000252816 PDIA5Q14554 519 aa25.55■■□□□ 1.68
LSM4-201ENST00000252816 CATSPER4Q7RTX7 472 aa25.55■■□□□ 1.68
LSM4-201ENST00000252816 ASAP3Q8TDY4 903 aa25.55■■□□□ 1.68
LSM4-201ENST00000252816 MRPL38Q96DV4 380 aaKnown RBP25.55■■□□□ 1.68
LSM4-201ENST00000252816 CHST12Q9NRB3 414 aa25.55■■□□□ 1.68
LSM4-201ENST00000252816 LAD1O00515 517 aa25.54■■□□□ 1.68
LSM4-201ENST00000252816 ATF7P17544 494 aaPredicted RBP25.54■■□□□ 1.68
LSM4-201ENST00000252816 CCT6AP40227 531 aaKnown RBP25.54■■□□□ 1.68
LSM4-201ENST00000252816 PRPHP41219 470 aa25.54■■□□□ 1.68
LSM4-201ENST00000252816 HAUS3Q68CZ6 603 aa25.54■■□□□ 1.68
LSM4-201ENST00000252816 SRGAP1Q7Z6B7 1085 aa25.54■■□□□ 1.68
LSM4-201ENST00000252816 ZNF598Q86UK7 904 aaKnown RBP25.54■■□□□ 1.68
LSM4-201ENST00000252816 DACT1Q9NYF0 836 aa25.54■■□□□ 1.68
LSM4-201ENST00000252816 HCSTQ9UBK5 93 aa25.54■■□□□ 1.68
LSM4-201ENST00000252816 PIN4Q9Y237 131 aaKnown RBP25.54■■□□□ 1.68
LSM4-201ENST00000252816 FNDC1Q4ZHG4 1894 aaPredicted RBP25.53■■□□□ 1.68
LSM4-201ENST00000252816 PP2D1A8MPX8 630 aa25.53■■□□□ 1.68
LSM4-201ENST00000252816 GLRA2P23416 452 aa25.53■■□□□ 1.68
LSM4-201ENST00000252816 ATP2C1P98194 919 aaPredicted RBP25.53■■□□□ 1.68
LSM4-201ENST00000252816 MXD4Q14582 209 aaPredicted RBP25.53■■□□□ 1.68
LSM4-201ENST00000252816 SKIV2LQ15477 1246 aaKnown RBP25.53■■□□□ 1.68
LSM4-201ENST00000252816 C11orf84Q9BUA3 381 aaPredicted RBP25.53■■□□□ 1.68
LSM4-201ENST00000252816 GPRC5CQ9NQ84 441 aa25.53■■□□□ 1.68
LSM4-201ENST00000252816 AGPAT5Q9NUQ2 364 aa25.53■■□□□ 1.68
LSM4-201ENST00000252816 THEGQ9P2T0 379 aa25.53■■□□□ 1.68
LSM4-201ENST00000252816 KIAA1671Q9BY89 1806 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 GRM6O15303 877 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 MUTP22033 750 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 CDC25AP30304 524 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 PTENP60484 403 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 CAPSQ13938 189 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 TWF2Q6IBS0 349 aaKnown RBP25.52■■□□□ 1.68
LSM4-201ENST00000252816 DTHD1Q6ZMT9 781 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 MAEAQ7L5Y9 396 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 RNF169Q8NCN4 708 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 CASD1Q96PB1 797 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 TRAIPQ9BWF2 469 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 PLVAPQ9BX97 442 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 TMEM117Q9H0C3 514 aa25.52■■□□□ 1.68
LSM4-201ENST00000252816 POLR3FQ9H1D9 316 aaPredicted RBP25.52■■□□□ 1.68
LSM4-201ENST00000252816 PHKA2P46019 1235 aa25.51■■□□□ 1.67
LSM4-201ENST00000252816 PTPROQ16827 1216 aa25.51■■□□□ 1.67
LSM4-201ENST00000252816 CLLU1OSQ5K130 101 aa25.51■■□□□ 1.67
LSM4-201ENST00000252816 SNX29Q8TEQ0 813 aa25.51■■□□□ 1.67
LSM4-201ENST00000252816 RAB34Q9BZG1 259 aa25.51■■□□□ 1.67
LSM4-201ENST00000252816 TYW1Q9NV66 732 aaKnown RBP25.51■■□□□ 1.67
LSM4-201ENST00000252816 KIAA1024Q9UPX6 916 aa25.51■■□□□ 1.67
LSM4-201ENST00000252816 VPS37CA5D8V6 355 aaPredicted RBP25.5■■□□□ 1.67
LSM4-201ENST00000252816 ARHGEF35A5YM69 484 aa25.5■■□□□ 1.67
LSM4-201ENST00000252816 K7ELQ4 463 aaPredicted RBP25.5■■□□□ 1.67
LSM4-201ENST00000252816 EOMESO95936 686 aa25.5■■□□□ 1.67
LSM4-201ENST00000252816 HOXA11P31270 313 aaPredicted RBP25.5■■□□□ 1.67
LSM4-201ENST00000252816 MYO7AQ13402 2215 aa25.5■■□□□ 1.67
LSM4-201ENST00000252816 TFDP1Q14186 410 aa25.5■■□□□ 1.67
LSM4-201ENST00000252816 PADI6Q6TGC4 694 aa25.5■■□□□ 1.67
LSM4-201ENST00000252816 LRRC55Q6ZSA7 311 aa25.5■■□□□ 1.67
LSM4-201ENST00000252816 IFNLR1Q8IU57 520 aaPredicted RBP25.5■■□□□ 1.67
LSM4-201ENST00000252816 P2RX5Q93086 422 aa25.5■■□□□ 1.67
LSM4-201ENST00000252816 INTS4Q96HW7 963 aaKnown RBP25.5■■□□□ 1.67
LSM4-201ENST00000252816 MMTAG2Q9BU76 263 aaKnown RBP25.5■■□□□ 1.67
LSM4-201ENST00000252816 CWH43Q9H720 699 aa25.5■■□□□ 1.67
LSM4-201ENST00000252816 ALG13Q9NP73 1137 aaKnown RBP25.5■■□□□ 1.67
LSM4-201ENST00000252816 FOXD4L1Q9NU39 408 aa25.5■■□□□ 1.67
LSM4-201ENST00000252816 PLAGL2Q9UPG8 496 aa25.5■■□□□ 1.67
LSM4-201ENST00000252816 HOXA2O43364 376 aa25.49■■□□□ 1.67
LSM4-201ENST00000252816 POU5F1BQ06416 359 aa25.49■■□□□ 1.67
LSM4-201ENST00000252816 BRAPQ7Z569 592 aa25.49■■□□□ 1.67
LSM4-201ENST00000252816 KLHL23Q8NBE8 558 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms