RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 POLR3FQ9H1D9 316 aaPredicted RBP15.58■□□□□ 0.08
SDF2-201ENST00000247020 CAPN11Q9UMQ6 739 aa15.58■□□□□ 0.08
SDF2-201ENST00000247020 ZSWIM8A7E2V4 1837 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 HOXD8P13378 290 aaPredicted RBP15.57■□□□□ 0.08
SDF2-201ENST00000247020 CASP14P31944 242 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 ARL2P36404 184 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 NAMPTP43490 491 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 NOGQ13253 232 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 NOLC1Q14978 699 aaKnown RBP eCLIP15.57■□□□□ 0.08
SDF2-201ENST00000247020 SYCP1Q15431 976 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 TRMT1LQ7Z2T5 733 aaKnown RBP15.57■□□□□ 0.08
SDF2-201ENST00000247020 TMEM139Q8IV31 216 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 TCP11Q8WWU5 503 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 COPS5Q92905 334 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 BAG1Q99933 345 aaPredicted RBP15.57■□□□□ 0.08
SDF2-201ENST00000247020 ERAP1Q9NZ08 941 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 ARHGAP28Q9P2N2 729 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 TBX20Q9UMR3 447 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 FRMD4BQ9Y2L6 1034 aa15.57■□□□□ 0.08
SDF2-201ENST00000247020 PHLPP2Q6ZVD8 1323 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 CASP8AP2Q9UKL3 1982 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 IGKV6-21A0A0C4DH24 114 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 CCDC169A6NNP5 214 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 CLIC2O15247 247 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 SLC16A4O15374 487 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 CCP110O43303 1012 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 PPFIA4O75335 1185 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 XRCC5P13010 732 aaKnown RBP15.56■□□□□ 0.08
SDF2-201ENST00000247020 ADKP55263 362 aaKnown RBP15.56■□□□□ 0.08
SDF2-201ENST00000247020 MCCD1P59942 119 aaPredicted RBP15.56■□□□□ 0.08
SDF2-201ENST00000247020 CRHR2Q13324 411 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 PLCB4Q15147 1175 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 PTPN21Q16825 1174 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 CEP135Q66GS9 1140 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 APBA2Q99767 749 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 SIK3Q9Y2K2 1263 aa15.56■□□□□ 0.08
SDF2-201ENST00000247020 COL1A2P08123 1366 aa15.55■□□□□ 0.08
SDF2-201ENST00000247020 GTPBP10A4D1E9 387 aaKnown RBP15.55■□□□□ 0.08
SDF2-201ENST00000247020 AKAP3O75969 853 aa15.55■□□□□ 0.08
SDF2-201ENST00000247020 TRIM21P19474 475 aaKnown RBP15.55■□□□□ 0.08
SDF2-201ENST00000247020 ADCYAP1R1P41586 468 aa15.55■□□□□ 0.08
SDF2-201ENST00000247020 FXR1P51114 621 aaKnown RBP eCLIP15.55■□□□□ 0.08
SDF2-201ENST00000247020 HSP90AA2PQ14568 343 aaPredicted RBP15.55■□□□□ 0.08
SDF2-201ENST00000247020 IER5Q5VY09 327 aa15.55■□□□□ 0.08
SDF2-201ENST00000247020 FAM186BQ8IYM0 893 aa15.55■□□□□ 0.08
SDF2-201ENST00000247020 BSNDQ8WZ55 320 aa15.55■□□□□ 0.08
SDF2-201ENST00000247020 BORCS6Q96GS4 357 aa15.55■□□□□ 0.08
SDF2-201ENST00000247020 ABHD10Q9NUJ1 306 aa15.55■□□□□ 0.08
SDF2-201ENST00000247020 LUC7L2Q9Y383 392 aaKnown RBP15.55■□□□□ 0.08
SDF2-201ENST00000247020 DENND3A2RUS2 1198 aa15.54■□□□□ 0.08
SDF2-201ENST00000247020 IGHA2P01877 340 aa15.54■□□□□ 0.08
SDF2-201ENST00000247020 AFPP02771 609 aaKnown RBP15.54■□□□□ 0.08
SDF2-201ENST00000247020 LGALS2P05162 132 aa15.54■□□□□ 0.08
SDF2-201ENST00000247020 ZBED6P86452 979 aa15.54■□□□□ 0.08
SDF2-201ENST00000247020 ENPEPQ07075 957 aa15.54■□□□□ 0.08
SDF2-201ENST00000247020 KCNH2Q12809 1159 aa15.54■□□□□ 0.08
SDF2-201ENST00000247020 BRDTQ58F21 947 aaPredicted RBP15.54■□□□□ 0.08
SDF2-201ENST00000247020 ZNF484Q5JVG2 852 aa15.54■□□□□ 0.08
SDF2-201ENST00000247020 ZNF397Q8NF99 534 aaPredicted RBP15.54■□□□□ 0.08
SDF2-201ENST00000247020 DNAJC7Q99615 494 aa15.54■□□□□ 0.08
SDF2-201ENST00000247020 TMEM134Q9H6X4 195 aa15.54■□□□□ 0.08
SDF2-201ENST00000247020 ZNF215Q9UL58 517 aaPredicted RBP15.54■□□□□ 0.08
SDF2-201ENST00000247020 TTC26A0AVF1 554 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 TNPO2O14787 897 aaKnown RBP15.53■□□□□ 0.08
SDF2-201ENST00000247020 KIAA0391O15091 583 aaKnown RBP15.53■□□□□ 0.08
SDF2-201ENST00000247020 PIGRP01833 764 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 SMPD1P17405 629 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 KRT9P35527 623 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 MXD4Q14582 209 aaPredicted RBP15.53■□□□□ 0.08
SDF2-201ENST00000247020 INTS8Q75QN2 995 aaKnown RBP15.53■□□□□ 0.08
SDF2-201ENST00000247020 TMTC1Q8IUR5 882 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 KSR1Q8IVT5 923 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 XXYLT1Q8NBI6 393 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 OR8K1Q8NGG5 319 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 PCMTD1Q96MG8 357 aaPredicted RBP15.53■□□□□ 0.08
SDF2-201ENST00000247020 GJD2Q9UKL4 321 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 ZHX1Q9UKY1 873 aaPredicted RBP15.53■□□□□ 0.08
SDF2-201ENST00000247020 Q9Y3F1 56 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 DAAM1Q9Y4D1 1078 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 RASSF10A6NK89 507 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 ZBTB42B2RXF5 422 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 EXOC3O60645 756 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 GARTP22102 1010 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 GLRA2P23416 452 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 CASP4P49662 377 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 TSR1Q2NL82 804 aaKnown RBP15.53■□□□□ 0.08
SDF2-201ENST00000247020 NEK11Q8NG66 645 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 CPLX3Q8WVH0 158 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 SLC35C1Q96A29 364 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 NUCKS1Q9H1E3 243 aaKnown RBP15.53■□□□□ 0.08
SDF2-201ENST00000247020 ADGRA3Q8IWK6 1321 aa15.53■□□□□ 0.08
SDF2-201ENST00000247020 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.52■□□□□ 0.07
SDF2-201ENST00000247020 MAGEB2O15479 319 aa15.52■□□□□ 0.07
SDF2-201ENST00000247020 ASAP2O43150 1006 aa15.52■□□□□ 0.07
SDF2-201ENST00000247020 MMP3P08254 477 aa15.52■□□□□ 0.07
SDF2-201ENST00000247020 CNGA1P29973 690 aa15.52■□□□□ 0.07
SDF2-201ENST00000247020 EFNA5P52803 228 aa15.52■□□□□ 0.07
SDF2-201ENST00000247020 FCGRTP55899 365 aa15.52■□□□□ 0.07
SDF2-201ENST00000247020 SOX10P56693 466 aa15.52■□□□□ 0.07
SDF2-201ENST00000247020 TNFAIP2Q03169 654 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms