RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 TFDP2Q14188 446 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 FAM47EQ6ZV65 393 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 RPF1Q9H9Y2 349 aaKnown RBP7.18□□□□□ -1.26
CSMD2-201ENST00000241312 NXF1Q9UBU9 619 aaKnown RBP7.18□□□□□ -1.26
CSMD2-201ENST00000241312 CLIC2O15247 247 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 KCNQ3O43525 872 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 CCDC22O60826 627 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 ATP1A3P13637 1013 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 INPP5AQ14642 412 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 RMDN2Q96LZ7 410 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 S100A5P33763 92 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 RAD23BP54727 409 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 ZNF699Q32M78 642 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 POTEAQ6S8J7 498 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 UNC13DQ70J99 1090 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 DPP9Q86TI2 863 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 FAM167AQ96KS9 214 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 KLHL8Q9P2G9 620 aaPredicted RBP7.18□□□□□ -1.26
CSMD2-201ENST00000241312 NAALADL2Q58DX5 795 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 PODNQ7Z5L7 613 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 ERICH1Q86X53 443 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 RASGRP4Q8TDF6 673 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 KCNV2Q8TDN2 545 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 HSPH1Q92598 858 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 WWP1Q9H0M0 922 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 CYP21A2P08686 494 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 CACNB1Q02641 598 aaPredicted RBP7.18□□□□□ -1.26
CSMD2-201ENST00000241312 LRRC41Q15345 812 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 PIGSQ96S52 555 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 ADAM22Q9P0K1 906 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 PTCH1Q13635 1447 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 QRICH2Q9H0J4 1663 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 ZRANB2O95218 330 aaKnown RBP eCLIP7.18□□□□□ -1.26
CSMD2-201ENST00000241312 NBPF20Q3BBV1 942 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 DCTN4Q9UJW0 460 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 STAP1Q9ULZ2 295 aa7.18□□□□□ -1.26
CSMD2-201ENST00000241312 MYO1DO94832 1006 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 ZNF667Q5HYK9 610 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 RFX7Q2KHR2 1363 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 GGPS1O95749 300 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 GPS1Q13098 491 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 DCPSQ96C86 337 aaKnown RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 ANTXR1Q9H6X2 564 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 TBX22Q9Y458 520 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 TET3O43151 1660 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 KIAA0825Q8IV33 1275 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 ATG3Q9NT62 314 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 HACD3Q9P035 362 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 RECQLP46063 649 aaPredicted RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 AP3B2Q13367 1082 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 OR6B2Q6IFH4 312 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 SUGT1Q9Y2Z0 365 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 ZFYVE16Q7Z3T8 1539 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 SAMD9Q5K651 1589 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 CCDC78A2IDD5 438 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 RNF219Q5W0B1 726 aaPredicted RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 PPP1R18Q6NYC8 613 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 PATL1Q86TB9 770 aaKnown RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 UNC5CLQ8IV45 518 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 TAGAPQ8N103 731 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 GRAMD1AQ96CP6 724 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 YIPF3Q9GZM5 350 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 WNT8AQ9H1J5 351 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 SPHKAPQ2M3C7 1700 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 ATP10AO60312 1499 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 AATKQ6ZMQ8 1374 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 NSUN2Q08J23 767 aaKnown RBP eCLIP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 CATSPER3Q86XQ3 398 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 ZNF564Q8TBZ8 553 aaPredicted RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 PRR23D1E9PI22 279 aaPredicted RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 ANGPT2O15123 496 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 PRR23D2P0DMB1 279 aaPredicted RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 AARSP49588 968 aaKnown RBP eCLIP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 LBRQ14739 615 aaKnown RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 MB21D1Q8N884 522 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 PKD2L2Q9NZM6 624 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 HPCAL4Q9UM19 191 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 hCG_2014768A0A024R1R8 64 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 CTIFO43310 598 aaKnown RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 ZSCAN20P17040 1043 aaPredicted RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 GRIN1Q05586 938 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 MXD4Q14582 209 aaPredicted RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 HIF1AQ16665 826 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 EAPPQ56P03 285 aaPredicted RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 ACBD5Q5T8D3 534 aaPredicted RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 DEPDC1Q5TB30 811 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 TRIM72Q6ZMU5 477 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 BRIP1Q9BX63 1249 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 EML4Q9HC35 981 aaKnown RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 KLC4Q9NSK0 619 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 DDX56Q9NY93 547 aaKnown RBP7.17□□□□□ -1.26
CSMD2-201ENST00000241312 PCDHB6Q9Y5E3 794 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 SLC4A7Q9Y6M7 1214 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 SDC4P31431 198 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 HSPA2P54652 639 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 CC2D2BQ6DHV5 1058 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 TMEM270Q6UE05 265 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 ZBED8Q8IZ13 594 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 CNKSR1Q969H4 720 aa7.17□□□□□ -1.26
CSMD2-201ENST00000241312 AP5M1Q9H0R1 490 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms