RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TERB1Q8NA31 727 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 DGCR14Q96DF8 476 aaKnown RBP13.74□□□□□ -0.21
VAMP4-201ENST00000236192 NMRK1Q9NWW6 199 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 CAPN6Q9Y6Q1 641 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 PENKP01210 267 aaPredicted RBP13.74□□□□□ -0.21
VAMP4-201ENST00000236192 GALK1P51570 392 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 C21orf59P57076 290 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 DPYDQ12882 1025 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 NAB2Q15742 525 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 GPR141Q7Z602 305 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 AGTPBP1Q9UPW5 1226 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 APOBEC2Q9Y235 224 aaKnown RBP13.74□□□□□ -0.21
VAMP4-201ENST00000236192 AP4S1Q9Y587 144 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 IFNAR1P17181 557 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 CDK17Q00537 523 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 MYBPC2Q14324 1141 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 LDHAL6AQ6ZMR3 332 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 PASD1Q8IV76 773 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 AFAP1L2Q8N4X5 818 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 RNF169Q8NCN4 708 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 L3MBTL3Q96JM7 780 aaPredicted RBP13.73□□□□□ -0.21
VAMP4-201ENST00000236192 CNBD2Q96M20 576 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 TMEM237Q96Q45 408 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 WWP1Q9H0M0 922 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 MYLK2Q9H1R3 596 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 CLIC5Q9NZA1 410 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 HPSEQ9Y251 543 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 GOLGA8QA0A0J9YX86 632 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 IQANK1A0A1B0GTG1 560 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 GOLGA8OA6NCC3 632 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 GOLGA8NF8WBI6 632 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 XPO1O14980 1071 aaKnown RBP13.73□□□□□ -0.21
VAMP4-201ENST00000236192 TSPAN9O75954 239 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 GGPS1O95749 300 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 PPARGP37231 505 aaPredicted RBP13.73□□□□□ -0.21
VAMP4-201ENST00000236192 TXKP42681 527 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 LRRC63Q05C16 580 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 KDSRQ06136 332 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 GALNT17Q6IS24 598 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 NLRP9Q7RTR0 991 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 ERP44Q9BS26 406 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 BTBD10Q9BSF8 475 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 PAIP1Q9H074 479 aaKnown RBP13.73□□□□□ -0.21
VAMP4-201ENST00000236192 FAM96AQ9H5X1 160 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 DUSP10Q9Y6W6 482 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 PDS5AQ29RF7 1337 aaKnown RBP13.73□□□□□ -0.21
VAMP4-201ENST00000236192 SH2B2O14492 632 aaPredicted RBP13.73□□□□□ -0.21
VAMP4-201ENST00000236192 MBD4O95243 580 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 TTC4O95801 387 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 A1BGP04217 495 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 CNPY1Q3B7I2 92 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 PTPRN2Q92932 1015 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 MRPL1Q9BYD6 325 aaKnown RBP13.73□□□□□ -0.21
VAMP4-201ENST00000236192 LACRTQ9GZZ8 138 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 BHMT2Q9H2M3 363 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 PRDM16Q9HAZ2 1276 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 VAT1LQ9HCJ6 419 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 NPATQ14207 1427 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 EXOC3O60645 756 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 PLCG2P16885 1265 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 TATP17735 454 aaPredicted RBP13.73□□□□□ -0.21
VAMP4-201ENST00000236192 TNIP1Q15025 636 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 SCUBE1Q8IWY4 988 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 CMTR1Q8N1G2 835 aaKnown RBP13.73□□□□□ -0.21
VAMP4-201ENST00000236192 TRIM63Q969Q1 353 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 TTC17Q96AE7 1141 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 PGM2Q96G03 612 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 TRABDQ9H4I3 376 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 TBC1D7Q9P0N9 293 aa13.73□□□□□ -0.21
VAMP4-201ENST00000236192 SOS2Q07890 1332 aaPredicted RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 FAM13AO94988 1023 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 TJP3O95049 919 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 TTLL1O95922 423 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 FKBP3Q00688 224 aaKnown RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 CTDSPL2Q05D32 466 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 TRMT5Q32P41 509 aaKnown RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 RNF43Q68DV7 783 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 TLDC1Q6P9B6 456 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 SLF2Q8IX21 1173 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 IQCKQ8N0W5 287 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 NAT14Q8WUY8 206 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 STK36Q9NRP7 1315 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 A0A0U1RQJ8 604 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 NCF2P19878 526 aaPredicted RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 TEDDM1Q5T9Z0 273 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 CCDC137Q6PK04 289 aaKnown RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 RNF207Q6ZRF8 634 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 LPCAT2Q7L5N7 544 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 VPS50Q96JG6 964 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 ARPP21Q9UBL0 812 aaPredicted RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 WARS2Q9UGM6 360 aaKnown RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 FOXP2O15409 715 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 KCNA2P16389 499 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 TMPRSS15P98073 1019 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 RNF26Q9BY78 433 aaPredicted RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 RFX7Q2KHR2 1363 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 H3BRJ5 948 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms