RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 CDY2AQ9Y6F7 541 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 ALPK3Q96L96 1907 aa11.25□□□□□ -0.61
HMGCL-201ENST00000235958 A0A087WZ62 844 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 CCDC169A6NNP5 214 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 RBAK-RBAKDNI3L0D1 243 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 M0QZ92 97 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 KLRC4O43908 158 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 CAND2O75155 1236 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 TBCAO75347 108 aaKnown RBP11.24□□□□□ -0.61
HMGCL-201ENST00000235958 CSDE1O75534 798 aaKnown RBP11.24□□□□□ -0.61
HMGCL-201ENST00000235958 MBD3O95983 291 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 TIMP1P01033 207 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 CTSHP09668 335 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 IQCF3P0C7M6 154 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 PLS3P13797 630 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 RAG1P15918 1043 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 SELPP16109 830 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 PTMSP20962 102 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 ITGB8P26012 769 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 NPTX2P47972 431 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 CRYBB1P53674 252 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-201ENST00000235958 PTENP60484 403 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 POU5F1BQ06416 359 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 RBL2Q08999 1139 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 TFDP1Q14186 410 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 PPP2R5AQ15172 486 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 HERC4Q5GLZ8 1057 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-201ENST00000235958 ODR4Q5SWX8 454 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 TRAF7Q6Q0C0 670 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 CCDC65Q8IXS2 484 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 C7orf61Q8IZ16 206 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 CCDC155Q8N6L0 562 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 NLRP7Q8WX94 980 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 ERCC4Q92889 916 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-201ENST00000235958 NLRP4Q96MN2 994 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 FDXACB1Q9BRP7 624 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-201ENST00000235958 OSBPL7Q9BZF2 842 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 PPP1R12CQ9BZL4 782 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 IFT122Q9HBG6 1241 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 PRDM5Q9NQX1 630 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-201ENST00000235958 LARSQ9P2J5 1176 aaKnown RBP11.24□□□□□ -0.61
HMGCL-201ENST00000235958 PCDHA5Q9Y5H7 936 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 UMODL1Q5DID0 1318 aa11.24□□□□□ -0.61
HMGCL-201ENST00000235958 TET1Q8NFU7 2136 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 FRMD3A2A2Y4 597 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 LRRIQ4A6NIV6 560 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 SLC16A4O15374 487 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 TRAK2O60296 914 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 RPN1P04843 607 aaKnown RBP11.23□□□□□ -0.61
HMGCL-201ENST00000235958 GAP43P17677 238 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 EIF4BP23588 611 aaKnown RBP11.23□□□□□ -0.61
HMGCL-201ENST00000235958 NAMPTP43490 491 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 SARSP49591 514 aaKnown RBP11.23□□□□□ -0.61
HMGCL-201ENST00000235958 SMTNP53814 917 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 CCL23P55773 120 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 MGAT3Q09327 533 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 CAPSQ13938 189 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 GPNMBQ14956 572 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 KMT5BQ4FZB7 885 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 UNC13DQ70J99 1090 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 LRRC8DQ7L1W4 858 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 ZNF410Q86VK4 478 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 SFR1Q86XK3 245 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 FAM178BQ8IXR5 827 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 SPATA20Q8TB22 786 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 HPS3Q969F9 1004 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 SCLT1Q96NL6 688 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 OSMRQ99650 979 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 GCOM2Q9BZD3 368 aaPredicted RBP11.23□□□□□ -0.61
HMGCL-201ENST00000235958 CLSTN2Q9H4D0 955 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 KMT5AQ9NQR1 393 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 TBC1D7Q9P0N9 293 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 SEL1LQ9UBV2 794 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 PRKAG2Q9UGJ0 569 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 TRPV2Q9Y5S1 764 aa11.23□□□□□ -0.61
HMGCL-201ENST00000235958 K7ERI5 159 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 SMC2O95347 1197 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 DARSP14868 501 aaKnown RBP11.22□□□□□ -0.61
HMGCL-201ENST00000235958 NMT1P30419 496 aaKnown RBP11.22□□□□□ -0.61
HMGCL-201ENST00000235958 PHKA2P46019 1235 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 COASYQ13057 564 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 PSMD2Q13200 908 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 DMP1Q13316 513 aaPredicted RBP11.22□□□□□ -0.61
HMGCL-201ENST00000235958 MBTPS1Q14703 1052 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 SKOR2Q2VWA4 1001 aaPredicted RBP11.22□□□□□ -0.61
HMGCL-201ENST00000235958 FBXO47Q5MNV8 452 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 ZNF720Q7Z2F6 126 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 HAUS6Q7Z4H7 955 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 SRGAP1Q7Z6B7 1085 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 DEPTORQ8TB45 409 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 TMEM40Q8WWA1 233 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 SMARCE1Q969G3 411 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 SCLYQ96I15 445 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 GSDMAQ96QA5 445 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 FIZ1Q96SL8 496 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 KIFC3Q9BVG8 833 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 NFKBIZQ9BYH8 718 aa11.22□□□□□ -0.61
HMGCL-201ENST00000235958 INO80BQ9C086 356 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms