RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 TISP43B9A030 160 aa20.89■□□□□ 0.93
YBX3-201ENST00000228251 ZNF862O60290 1169 aa20.89■□□□□ 0.93
YBX3-201ENST00000228251 TRIM49P0CI25 452 aa20.89■□□□□ 0.93
YBX3-201ENST00000228251 TRIM49CP0CI26 452 aa20.89■□□□□ 0.93
YBX3-201ENST00000228251 C1orf220Q5T0J3 134 aa20.89■□□□□ 0.93
YBX3-201ENST00000228251 HAUS6Q7Z4H7 955 aa20.89■□□□□ 0.93
YBX3-201ENST00000228251 MSL3Q8N5Y2 521 aaKnown RBP20.89■□□□□ 0.93
YBX3-201ENST00000228251 PCDHA10Q9Y5I2 948 aa20.89■□□□□ 0.93
YBX3-201ENST00000228251 LRRC37A2A6NM11 1700 aa20.89■□□□□ 0.93
YBX3-201ENST00000228251 F8VZ95 297 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 BUB1O43683 1085 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 EXOC3O60645 756 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 USP2O75604 605 aaPredicted RBP20.88■□□□□ 0.93
YBX3-201ENST00000228251 FERP16591 822 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 NPEPPSP55786 919 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 KIAA0753Q2KHM9 967 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 UTP14CQ5TAP6 766 aaKnown RBP20.88■□□□□ 0.93
YBX3-201ENST00000228251 PLA2G4FQ68DD2 849 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 NFRKBQ6P4R8 1299 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 NLRX1Q86UT6 975 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 SYCP3Q8IZU3 236 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 SH2D3AQ9BRG2 576 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 STK33Q9BYT3 514 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 INTS2Q9H0H0 1204 aaKnown RBP20.88■□□□□ 0.93
YBX3-201ENST00000228251 ACAD9Q9H845 621 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 ABCB6Q9NP58 842 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 GPRC5CQ9NQ84 441 aa20.88■□□□□ 0.93
YBX3-201ENST00000228251 GFPT2O94808 682 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 MMGT1Q8N4V1 131 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 SLC30A5Q8TAD4 765 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 CBWD1Q9BRT8 395 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 PDLIM7Q9NR12 457 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 TSKSQ9UJT2 592 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 SNCAIPQ9Y6H5 919 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 SIP14410 1827 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 NCK2O43639 380 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 STAM2O75886 525 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 LMNB1P20700 586 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 MYL7Q01449 175 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 GABPB1Q06547 395 aaPredicted RBP20.87■□□□□ 0.93
YBX3-201ENST00000228251 SUPT20HL1Q3ZLR7 823 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 XKR9Q5GH70 373 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.87■□□□□ 0.93
YBX3-201ENST00000228251 INTS8Q75QN2 995 aaKnown RBP20.87■□□□□ 0.93
YBX3-201ENST00000228251 SLC17A8Q8NDX2 589 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 TMEM161BQ8NDZ6 487 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.87■□□□□ 0.93
YBX3-201ENST00000228251 TMOD4Q9NZQ9 345 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 APEX2Q9UBZ4 518 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 USP20Q9Y2K6 914 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 TELO2Q9Y4R8 837 aa20.87■□□□□ 0.93
YBX3-201ENST00000228251 GRID2IPA4D2P6 1211 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 SPATA31C2B4DYI2 1134 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 DDX3XO00571 662 aaKnown RBP eCLIP20.86■□□□□ 0.932e-12■■□□□ 13.9
YBX3-201ENST00000228251 PMM2O15305 246 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 PALMO75781 387 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 SOX5P35711 763 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 STAT1P42224 750 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 PLS1Q14651 629 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 ENOX2Q16206 610 aaKnown RBP20.86■□□□□ 0.93
YBX3-201ENST00000228251 MEI1Q5TIA1 1274 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 PLEKHO2Q8TD55 490 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 HVCN1Q96D96 273 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 NTPCRQ9BSD7 190 aaKnown RBP20.86■□□□□ 0.93
YBX3-201ENST00000228251 ST7Q9NRC1 585 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 HOXC10Q9NYD6 342 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 DNAJC12Q9UKB3 198 aa20.86■□□□□ 0.93
YBX3-201ENST00000228251 SLC16A4O15374 487 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 P4HA2O15460 535 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 EVI5O60447 810 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 ERLIN1O75477 346 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 PEX3P56589 373 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 DLG4P78352 724 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 ALKBH5Q6P6C2 394 aaKnown RBP20.85■□□□□ 0.93
YBX3-201ENST00000228251 MAP4K3Q8IVH8 894 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 ZSWIM2Q8NEG5 633 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 SPIRE2Q8WWL2 714 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 IWS1Q96ST2 819 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 HSPBP1Q9NZL4 362 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 INTUQ9ULD6 942 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 UTRNP46939 3433 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 RFX1P22670 979 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 PPP3CAQ08209 521 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 DRAP1Q14919 205 aaPredicted RBP20.85■□□□□ 0.93
YBX3-201ENST00000228251 EPC2Q52LR7 807 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 PHLDB3Q6NSJ2 640 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 LRRC57Q8N9N7 239 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 XXYLT1Q8NBI6 393 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 LNX1Q8TBB1 728 aaPredicted RBP20.85■□□□□ 0.93
YBX3-201ENST00000228251 BSNDQ8WZ55 320 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 CDHR1Q96JP9 859 aa20.85■□□□□ 0.93
YBX3-201ENST00000228251 PFASO15067 1338 aa20.84■□□□□ 0.93
YBX3-201ENST00000228251 ADSSP30520 456 aa20.84■□□□□ 0.93
YBX3-201ENST00000228251 NPTX2P47972 431 aa20.84■□□□□ 0.93
YBX3-201ENST00000228251 VAMP7P51809 220 aa20.84■□□□□ 0.93
YBX3-201ENST00000228251 ABHD15Q6UXT9 468 aa20.84■□□□□ 0.93
YBX3-201ENST00000228251 SPATA4Q8NEY3 305 aa20.84■□□□□ 0.93
YBX3-201ENST00000228251 CAGE1Q8TC20 777 aa20.84■□□□□ 0.93
YBX3-201ENST00000228251 PCIF1Q9H4Z3 704 aa20.84■□□□□ 0.93
YBX3-201ENST00000228251 C17orf75Q9HAS0 396 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms