RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 MMEL1Q495T6 779 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 CCDC170Q8IYT3 715 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 VCPKMTQ9H867 229 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 RARBP10826 455 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 KCNJ6P48051 423 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 EXT2Q93063 718 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 PCGF5Q86SE9 256 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 SGMS1Q86VZ5 419 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 JRKLQ9Y4A0 524 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 PHLPP2Q6ZVD8 1323 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 MADDQ8WXG6 1647 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 RFX7Q2KHR2 1363 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 PRKCBP05771 671 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 ZNF579Q8NAF0 562 aaKnown RBP19.78■□□□□ 0.76
CLIP2-201ENST00000223398 E9PCH4 1651 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 FAM205CA6NFA0 338 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 NR3C2P08235 984 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 MRPS25P82663 173 aaKnown RBP19.78■□□□□ 0.76
CLIP2-201ENST00000223398 KCNV1Q6PIU1 500 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 CDC26Q8NHZ8 85 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 MTA3Q9BTC8 594 aa19.78■□□□□ 0.76
CLIP2-201ENST00000223398 RWDD2BP57060 319 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 ACCSLQ4AC99 568 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 SLC16A10Q8TF71 515 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 NUDCD1Q96RS6 583 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 VCX3BQ9H321 246 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 PVALEFA0A1B0GWK0 134 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 CETPP11597 493 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 LRRC31Q6UY01 552 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 NEXMIFQ5QGS0 1516 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 GOLGA8KD6RF30 607 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 SPOPLQ6IQ16 392 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 TOGARAM2Q6ZUX3 1019 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 GPD1LQ8N335 351 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 NYAP2Q9P242 653 aa19.77■□□□□ 0.76
CLIP2-201ENST00000223398 KLHL8Q9P2G9 620 aaPredicted RBP19.77■□□□□ 0.76
CLIP2-201ENST00000223398 LRRC53A6NM62 1247 aa19.77■□□□□ 0.75
CLIP2-201ENST00000223398 GPRC5AQ8NFJ5 357 aa19.77■□□□□ 0.75
CLIP2-201ENST00000223398 AGBL1Q96MI9 1066 aa19.77■□□□□ 0.75
CLIP2-201ENST00000223398 INTS5Q6P9B9 1019 aaKnown RBP19.76■□□□□ 0.75
CLIP2-201ENST00000223398 ATG4CQ96DT6 458 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 SIK2Q9H0K1 926 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 PIK3R2O00459 728 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 GNA15P30679 374 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 ACAP3Q96P50 834 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 INTS2Q9H0H0 1204 aaKnown RBP19.76■□□□□ 0.75
CLIP2-201ENST00000223398 MYO3AQ8NEV4 1616 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 RIMBP3CA6NJZ7 1639 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 RIMBP3BA6NNM3 1639 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 RIMBP3Q9UFD9 1639 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 RASA1P20936 1047 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 FBXO33Q7Z6M2 555 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 ANKRD13AQ8IZ07 590 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 DEPDC1BQ8WUY9 529 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 HPS3Q969F9 1004 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 LBHD1Q9BQE6 289 aaPredicted RBP19.76■□□□□ 0.75
CLIP2-201ENST00000223398 ARHGEF40Q8TER5 1519 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 FOXN1O15353 648 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 GH1P01241 217 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 C16orf86Q6ZW13 317 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 FAF2Q96CS3 445 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 SPZ1Q9BXG8 430 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 GINM1Q9NU53 330 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 DIP2CQ9Y2E4 1556 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 CPS1P31327 1500 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 GYS1P13807 737 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 SLC7A5Q01650 507 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 DHX9Q08211 1270 aaKnown RBP19.76■□□□□ 0.75
CLIP2-201ENST00000223398 PBKQ96KB5 322 aa19.76■□□□□ 0.75
CLIP2-201ENST00000223398 PSMC1P62191 440 aaKnown RBP19.75■□□□□ 0.75
CLIP2-201ENST00000223398 IRX4P78413 519 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 GLYCTKQ8IVS8 523 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 SPON2Q9BUD6 331 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 DIP2AQ14689 1571 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 ZNF609O15014 1411 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 FGGP02679 453 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 HPCAL4Q9UM19 191 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 MFAP3LO75121 409 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 ASNSD1Q9NWL6 643 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 CEP72Q9P209 647 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 PPME1Q9Y570 386 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 KDM6AO15550 1401 aaPredicted RBP19.75■□□□□ 0.75
CLIP2-201ENST00000223398 HOXA7P31268 230 aaPredicted RBP19.75■□□□□ 0.75
CLIP2-201ENST00000223398 SDC4P31431 198 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 KRT39Q6A163 491 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 RHOT2Q8IXI1 618 aa19.75■□□□□ 0.75
CLIP2-201ENST00000223398 EMSYQ7Z589 1322 aa19.74■□□□□ 0.75
CLIP2-201ENST00000223398 GFPT1Q06210 699 aaPredicted RBP19.74■□□□□ 0.75
CLIP2-201ENST00000223398 ZKSCAN8Q15776 578 aaPredicted RBP19.74■□□□□ 0.75
CLIP2-201ENST00000223398 PROM2Q8N271 834 aa19.74■□□□□ 0.75
CLIP2-201ENST00000223398 VCXQ9H320 206 aa19.74■□□□□ 0.75
CLIP2-201ENST00000223398 POLRMTO00411 1230 aaKnown RBP19.74■□□□□ 0.75
CLIP2-201ENST00000223398 LCP1P13796 627 aa19.74■□□□□ 0.75
CLIP2-201ENST00000223398 RPS12P25398 132 aaKnown RBP19.74■□□□□ 0.75
CLIP2-201ENST00000223398 DR1Q01658 176 aa19.74■□□□□ 0.75
CLIP2-201ENST00000223398 SBK1Q52WX2 424 aa19.74■□□□□ 0.75
CLIP2-201ENST00000223398 NDUFAF2Q8N183 169 aa19.74■□□□□ 0.75
CLIP2-201ENST00000223398 SEPT1Q8WYJ6 367 aa19.74■□□□□ 0.75
CLIP2-201ENST00000223398 RNF25Q96BH1 459 aaPredicted RBP19.74■□□□□ 0.75
CLIP2-201ENST00000223398 ACOT2P49753 483 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms