RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 KRT71Q3SY84 523 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 DALRD3Q5D0E6 543 aaKnown RBP11.39□□□□□ -0.59
VPS18-201ENST00000220509 CCDC25Q86WR0 208 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 RETREG2Q8NC44 543 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 CCT8L2Q96SF2 557 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 PAPOLBQ9NRJ5 636 aaKnown RBP11.39□□□□□ -0.59
VPS18-201ENST00000220509 STIM2Q9P246 746 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 SEL1LQ9UBV2 794 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 ATP8A1Q9Y2Q0 1164 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 LAMB4A4D0S4 1761 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 MYZAPP0CAP1 466 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 IL1R1P14778 569 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 CTNNA1P35221 906 aaKnown RBP11.39□□□□□ -0.59
VPS18-201ENST00000220509 RCSD1Q6JBY9 416 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 TRAPPC11Q7Z392 1133 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 RAD54LQ92698 747 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 OSBPL9Q96SU4 736 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 ZMYND12Q9H0C1 365 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 ZNF408Q9H9D4 720 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 AASDHPPTQ9NRN7 309 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 PRELID1Q9Y255 219 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 PSMD14O00487 310 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 LRRN2O75325 713 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 TRPC1P48995 793 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 MYO1EQ12965 1108 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 SEPT7Q16181 437 aaKnown RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 SHROOM1Q2M3G4 852 aaPredicted RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 NAA35Q5VZE5 725 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 ADSSL1Q8N142 457 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 ZNF473Q8WTR7 871 aaKnown RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 RPGRIP1Q96KN7 1286 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 IFT74Q96LB3 600 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 SLC39A3Q9BRY0 314 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 VIPAS39Q9H9C1 493 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 PAIP2BQ9ULR5 123 aaKnown RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 GINS2Q9Y248 185 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 BZW2Q9Y6E2 419 aaKnown RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 DDTLA6NHG4 134 aaPredicted RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 UNCXA6NJT0 531 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 EIF3FO00303 357 aaPredicted RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 TPPPO94811 219 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 KIF11P52732 1056 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 LRRC63Q05C16 580 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 COASYQ13057 564 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 PAK2Q13177 524 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 FAM133BQ5BKY9 247 aaKnown RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 NLRP14Q86W24 1093 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 SFR1Q86XK3 245 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 CCDC50Q8IVM0 306 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 HOOK2Q96ED9 719 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 PAGR1Q9BTK6 254 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 DPH5Q9H2P9 285 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 COL1A1P02452 1464 aaPredicted RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 ABCA3Q99758 1704 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 NDUFB10O96000 172 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 LDHAP00338 332 aaKnown RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 DLATP10515 647 aaKnown RBP11.38□□□□□ -0.59
VPS18-201ENST00000220509 GNAT1P11488 350 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 DAAM2Q86T65 1068 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 MFN1Q8IWA4 741 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 CCDC13Q8IYE1 715 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 FAM186BQ8IYM0 893 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 CACNA2D3Q8IZS8 1091 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 PPM1KQ8N3J5 372 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 DCAF4Q8WV16 495 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 SLX1AQ9BQ83 275 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 SYNCQ9H7C4 482 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 JMJD4Q9H9V9 463 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 HYOU1Q9Y4L1 999 aa11.38□□□□□ -0.59
VPS18-201ENST00000220509 NPHP3-ACAD11A0A0J9YXS1 232 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 RCCD1A6NED2 376 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 PPP1R3GB7ZBB8 358 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 PFDN1O60925 122 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 RPS6KA5O75582 802 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 ALOX15P16050 662 aaPredicted RBP11.37□□□□□ -0.59
VPS18-201ENST00000220509 TUFMP49411 452 aaKnown RBP11.37□□□□□ -0.59
VPS18-201ENST00000220509 TRIM68Q6AZZ1 485 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 TBC1D1Q86TI0 1168 aaPredicted RBP11.37□□□□□ -0.59
VPS18-201ENST00000220509 IQCDQ96DY2 449 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 CLIP3Q96DZ5 547 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 RBM41Q96IZ5 413 aaKnown RBP11.37□□□□□ -0.59
VPS18-201ENST00000220509 MPP4Q96JB8 637 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 SH2D3AQ9BRG2 576 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 PLVAPQ9BX97 442 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 SLC40A1Q9NP59 571 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 RBM12Q9NTZ6 932 aaKnown RBP11.37□□□□□ -0.59
VPS18-201ENST00000220509 CAPN6Q9Y6Q1 641 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 MYMKA6NI61 221 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 H2AFZP0C0S5 128 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 TAL1P17542 331 aaPredicted RBP11.37□□□□□ -0.59
VPS18-201ENST00000220509 HERVK_113P62684 666 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 LLGL1Q15334 1064 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 STRIP1Q5VSL9 837 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 H2AFVQ71UI9 128 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 MGARPQ8TDB4 240 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.37□□□□□ -0.59
VPS18-201ENST00000220509 PLAAQ9Y263 795 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 AGPSO00116 658 aa11.37□□□□□ -0.59
VPS18-201ENST00000220509 PPP1R37O75864 691 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms