RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TTC23LQ6PF05 361 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 TTC30BQ8N4P2 665 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 LPAR1Q92633 364 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 KIF12Q96FN5 646 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 POTEFA5A3E0 1075 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 GSG1L2A8MUP6 293 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 POTEIP0CG38 1075 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 POTEGQ6S5H5 508 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 POTEEQ6S8J3 1075 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 TRIM62Q9BVG3 475 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 MIF4GDA9UHW6 222 aaKnown RBP20.25■□□□□ 0.83
SMPD3-201ENST00000219334 AP3M2P53677 418 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 SCG3Q8WXD2 468 aaKnown RBP20.25■□□□□ 0.83
SMPD3-201ENST00000219334 DACT3Q96B18 629 aaPredicted RBP20.25■□□□□ 0.83
SMPD3-201ENST00000219334 ASIC4Q96FT7 647 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 JPH1Q9HDC5 661 aaPredicted RBP20.25■□□□□ 0.83
SMPD3-201ENST00000219334 CREB3O43889 395 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 EPHA7Q15375 998 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 ZKSCAN8Q15776 578 aaPredicted RBP20.25■□□□□ 0.83
SMPD3-201ENST00000219334 CCDC197Q8NCU1 140 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 C11orf70Q9BRQ4 267 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 DIS3Q9Y2L1 958 aaKnown RBP20.25■□□□□ 0.83
SMPD3-201ENST00000219334 TMEM247A6NEH6 219 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 RALAP11233 206 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 GPC5P78333 572 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 DRP2Q13474 957 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 KATNAL1Q9BW62 490 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 EDEM3Q9BZQ6 932 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 SUCLA2Q9P2R7 463 aaPredicted RBP20.24■□□□□ 0.83
SMPD3-201ENST00000219334 HEY1Q9Y5J3 304 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 CAPN7Q9Y6W3 813 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 SHROOM2Q13796 1616 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 RASGRF2O14827 1237 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 KRT39Q6A163 491 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 SPON2Q9BUD6 331 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 EFHD1Q9BUP0 239 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 ZNF521Q96K83 1311 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 ZMYND10O75800 440 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 ADORA2BP29275 332 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 SLCO1A2P46721 670 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 MB21D2Q8IYB1 491 aaPredicted RBP20.24■□□□□ 0.83
SMPD3-201ENST00000219334 FMO2Q99518 471 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 POLD4Q9HCU8 107 aa20.24■□□□□ 0.83
SMPD3-201ENST00000219334 KRT37O76014 449 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 TKFCQ3LXA3 575 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 TMCO4Q5TGY1 634 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 CYFIP1Q7L576 1253 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 AP1M1Q9BXS5 423 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 RRAGDQ9NQL2 400 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 GJB4Q9NTQ9 266 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 RBAKQ9NYW8 714 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 KDM6BO15054 1643 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 SESN3P58005 492 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 KCNH2Q12809 1159 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 CEP55Q53EZ4 464 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 BTBD8Q5XKL5 378 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 PRR5LQ6MZQ0 368 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 SCYL3Q8IZE3 742 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 ZNF280CQ8ND82 737 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 EIF2AK1Q9BQI3 630 aaKnown RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 OSBPL5Q9H0X9 879 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 KIF28PB7ZC32 967 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 OPHN1O60890 802 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 FGGP02679 453 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 C6orf222P0C671 652 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 PSMC1P62191 440 aaKnown RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 EFHC2Q5JST6 749 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 GBP5Q96PP8 586 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 PDE11AQ9HCR9 933 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 PIN4Q9Y237 131 aaKnown RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 MOCS2O96007 188 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 OCRLQ01968 901 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 ZSCAN26Q16670 478 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 DUOXA2Q1HG44 320 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 GPD1LQ8N335 351 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 RNF149Q8NC42 400 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 OXER1Q8TDS5 423 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 DDX27Q96GQ7 796 aaKnown RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 CALR3Q96L12 384 aaKnown RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 DYRK4Q9NR20 520 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 AGO2Q9UKV8 859 aaKnown RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 DAGLAQ9Y4D2 1042 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 RFX7Q2KHR2 1363 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 DYNC1LI2O43237 492 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 ARL4CP56559 192 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 HP1BP3Q5SSJ5 553 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 GTF3C2Q8WUA4 911 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-201ENST00000219334 PYCARDQ9ULZ3 195 aa20.23■□□□□ 0.83
SMPD3-201ENST00000219334 SNX2O60749 519 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 C12orf60Q5U649 245 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 TNIP3Q96KP6 325 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 ZBTB18Q99592 522 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 SP110Q9HB58 689 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 HACD3Q9P035 362 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 SMIM24O75264 130 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 ENTPD3O75355 529 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 PLS3P13797 630 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 GNA15P30679 374 aa20.22■□□□□ 0.83
SMPD3-201ENST00000219334 TOB2Q14106 344 aaPredicted RBP20.22■□□□□ 0.83
SMPD3-201ENST00000219334 PNPLA7Q6ZV29 1317 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms