RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 ALPK3Q96L96 1907 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 FRMD3A2A2Y4 597 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 LRRIQ4A6NIV6 560 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 CCDC169A6NNP5 214 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 RSPH10B2B2RC85 870 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 EVI5O60447 810 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 PARNO95453 639 aaKnown RBP14.55□□□□□ -0.08
TIMP1-201ENST00000218388 PRR29P0C7W0 189 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 RSPH10BP0C881 870 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 CKBP12277 381 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 SELPP16109 830 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 GLRA2P23416 452 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 PHKA2P46019 1235 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 GPC3P51654 580 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 PEX3P56589 373 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 NLRP11P59045 1033 aaKnown RBP14.55□□□□□ -0.08
TIMP1-201ENST00000218388 POU5F1BQ06416 359 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 DPYDQ12882 1025 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 PNOCQ13519 176 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 TRIM71Q2Q1W2 868 aaKnown RBP14.55□□□□□ -0.08
TIMP1-201ENST00000218388 KLHL40Q2TBA0 621 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 HERC4Q5GLZ8 1057 aaPredicted RBP14.55□□□□□ -0.08
TIMP1-201ENST00000218388 ODR4Q5SWX8 454 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 STXBP4Q6ZWJ1 553 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 FAM178BQ8IXR5 827 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 DAW1Q8N136 415 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 RNF149Q8NC42 400 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 SPIRE2Q8WWL2 714 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 SMARCE1Q969G3 411 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 NOC4LQ9BVI4 516 aaKnown RBP14.55□□□□□ -0.08
TIMP1-201ENST00000218388 CELF4Q9BZC1 486 aaKnown RBP14.55□□□□□ -0.08
TIMP1-201ENST00000218388 GCOM2Q9BZD3 368 aaPredicted RBP14.55□□□□□ -0.08
TIMP1-201ENST00000218388 GTPBP4Q9BZE4 634 aaKnown RBP14.55□□□□□ -0.08
TIMP1-201ENST00000218388 INO80BQ9C086 356 aaPredicted RBP14.55□□□□□ -0.08
TIMP1-201ENST00000218388 C2orf40Q9H1Z8 148 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 EXOC1Q9NV70 894 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 TBX21Q9UL17 535 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 GINS2Q9Y248 185 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 CDY2AQ9Y6F7 541 aa14.55□□□□□ -0.08
TIMP1-201ENST00000218388 SFI1A8K8P3 1242 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 KIAA0355O15063 1070 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 TRAK2O60296 914 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 GPR32O75388 356 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 RPN1P04843 607 aaKnown RBP14.54□□□□□ -0.08
TIMP1-201ENST00000218388 CTSHP09668 335 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 SRGAP2CP0DJJ0 459 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 MAPTP10636 758 aaKnown RBP14.54□□□□□ -0.08
TIMP1-201ENST00000218388 CASP1P29466 404 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 CRYBB1P53674 252 aaPredicted RBP14.54□□□□□ -0.08
TIMP1-201ENST00000218388 MDM2Q00987 491 aaPredicted RBP14.54□□□□□ -0.08
TIMP1-201ENST00000218388 TMEM62Q0P6H9 643 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 COASYQ13057 564 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 CAPSQ13938 189 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 CAMK4Q16566 473 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 KIZQ2M2Z5 673 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 FAM26DQ5JW98 314 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 CCDC183Q5T5S1 534 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 ZNF618Q5T7W0 954 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 LRRC8DQ7L1W4 858 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 DPF3Q92784 378 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 WNT8BQ93098 351 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 GSDMAQ96QA5 445 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 NFKBIZQ9BYH8 718 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 KMT5AQ9NQR1 393 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 OLFML3Q9NRN5 406 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 TANC1Q9C0D5 1861 aa14.54□□□□□ -0.08
TIMP1-201ENST00000218388 A0A087WZ62 844 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 K7ENM7 598 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 RAG1P15918 1043 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 NPTX2P47972 431 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 EFNA5P52803 228 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 MGAT3Q09327 533 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 PSMD2Q13200 908 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 ALCAMQ13740 583 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 KCNB1Q14721 858 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 PCBP1Q15365 356 aaKnown RBP eCLIP14.53□□□□□ -0.085e-13■■■■□ 23.1
TIMP1-201ENST00000218388 FAM26FQ5R3K3 315 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 SRGAP1Q7Z6B7 1085 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 SFR1Q86XK3 245 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 IFNLR1Q8IU57 520 aaPredicted RBP14.53□□□□□ -0.08
TIMP1-201ENST00000218388 KSR1Q8IVT5 923 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 C7orf61Q8IZ16 206 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 USP38Q8NB14 1042 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 BSNDQ8WZ55 320 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 PPP1R16BQ96T49 567 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 OSMRQ99650 979 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 FDXACB1Q9BRP7 624 aaPredicted RBP14.53□□□□□ -0.08
TIMP1-201ENST00000218388 NTPCRQ9BSD7 190 aaKnown RBP14.53□□□□□ -0.08
TIMP1-201ENST00000218388 PPP1R12CQ9BZL4 782 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 ADAMTS10Q9H324 1103 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 MRPL44Q9H9J2 332 aaKnown RBP14.53□□□□□ -0.08
TIMP1-201ENST00000218388 POLD4Q9HCU8 107 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 SQORQ9Y6N5 450 aa14.53□□□□□ -0.08
TIMP1-201ENST00000218388 KLRC4O43908 158 aa14.52□□□□□ -0.09
TIMP1-201ENST00000218388 TIMP1P01033 207 aa14.52□□□□□ -0.09
TIMP1-201ENST00000218388 SFPQP23246 707 aaKnown RBP eCLIP14.52□□□□□ -0.09
TIMP1-201ENST00000218388 EIF4BP23588 611 aaKnown RBP14.52□□□□□ -0.09
TIMP1-201ENST00000218388 PTENP60484 403 aa14.52□□□□□ -0.09
TIMP1-201ENST00000218388 KMT5BQ4FZB7 885 aa14.52□□□□□ -0.09
TIMP1-201ENST00000218388 CDCA2Q69YH5 1023 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms