RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 NAPGQ99747 312 aaPredicted RBP19.01■□□□□ 0.63
VRK1-201ENST00000216639 IFIH1Q9BYX4 1025 aaKnown RBP19.01■□□□□ 0.63
VRK1-201ENST00000216639 ZNF408Q9H9D4 720 aa19.01■□□□□ 0.63
VRK1-201ENST00000216639 TBX20Q9UMR3 447 aa19.01■□□□□ 0.63
VRK1-201ENST00000216639 DAAM1Q9Y4D1 1078 aa19.01■□□□□ 0.63
VRK1-201ENST00000216639 LOC102724159A0A0B4J2E5 919 aa19■□□□□ 0.63
VRK1-201ENST00000216639 OATP04181 439 aa19■□□□□ 0.63
VRK1-201ENST00000216639 PWP2Q15269 919 aaKnown RBP19■□□□□ 0.63
VRK1-201ENST00000216639 FAM160B1Q5W0V3 765 aa19■□□□□ 0.63
VRK1-201ENST00000216639 XXYLT1Q8NBI6 393 aa19■□□□□ 0.63
VRK1-201ENST00000216639 TMEM161BQ8NDZ6 487 aa19■□□□□ 0.63
VRK1-201ENST00000216639 PDLIM7Q9NR12 457 aa19■□□□□ 0.63
VRK1-201ENST00000216639 PCDHA13Q9Y5I0 950 aa19■□□□□ 0.63
VRK1-201ENST00000216639 MRFAP1Q9Y605 127 aa19■□□□□ 0.63
VRK1-201ENST00000216639 BZW2Q9Y6E2 419 aaKnown RBP19■□□□□ 0.63
VRK1-201ENST00000216639 WDR81Q562E7 1941 aa19■□□□□ 0.63
VRK1-201ENST00000216639 ARID2Q68CP9 1835 aa19■□□□□ 0.63
VRK1-201ENST00000216639 N4BP1O75113 896 aaKnown RBP19■□□□□ 0.63
VRK1-201ENST00000216639 FARP2O94887 1054 aaPredicted RBP19■□□□□ 0.63
VRK1-201ENST00000216639 SCP2P22307 547 aa19■□□□□ 0.63
VRK1-201ENST00000216639 GJA5P36382 358 aa19■□□□□ 0.63
VRK1-201ENST00000216639 POLGP54098 1239 aaPredicted RBP19■□□□□ 0.63
VRK1-201ENST00000216639 ERVK-9P63128 1117 aa19■□□□□ 0.63
VRK1-201ENST00000216639 FKBP1BP68106 108 aa19■□□□□ 0.63
VRK1-201ENST00000216639 CYP27A1Q02318 531 aa19■□□□□ 0.63
VRK1-201ENST00000216639 NCBP1Q09161 790 aaKnown RBP19■□□□□ 0.63
VRK1-201ENST00000216639 CETN1Q12798 172 aa19■□□□□ 0.63
VRK1-201ENST00000216639 Q3C1V9 767 aa19■□□□□ 0.63
VRK1-201ENST00000216639 MTERF2Q49AM1 385 aa19■□□□□ 0.63
VRK1-201ENST00000216639 WDR78Q5VTH9 848 aa19■□□□□ 0.63
VRK1-201ENST00000216639 HGSNATQ68CP4 663 aa19■□□□□ 0.63
VRK1-201ENST00000216639 MAP4K3Q8IVH8 894 aa19■□□□□ 0.63
VRK1-201ENST00000216639 HSPBP1Q9NZL4 362 aa19■□□□□ 0.63
VRK1-201ENST00000216639 SLC45A1Q9Y2W3 748 aa19■□□□□ 0.63
VRK1-201ENST00000216639 DOCK5Q9H7D0 1870 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 IGKV6D-21A0A0A0MT36 114 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 DENND3A2RUS2 1198 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 CETPP11597 493 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 ACTN1P12814 892 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 CCNA1P78396 465 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 RBM10P98175 930 aaKnown RBP18.99■□□□□ 0.63
VRK1-201ENST00000216639 KLHL30Q0D2K2 578 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 MAP1SQ66K74 1059 aaPredicted RBP18.99■□□□□ 0.63
VRK1-201ENST00000216639 METTL7BQ6UX53 244 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 FMNL3Q8IVF7 1028 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 PCIF1Q9H4Z3 704 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 MLXIPQ9HAP2 919 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 NRBP2Q9NSY0 501 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 TELO2Q9Y4R8 837 aa18.99■□□□□ 0.63
VRK1-201ENST00000216639 DNAJC25-GNG10A0A024R161 153 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 ABL1P00519 1130 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 PGK2P07205 417 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 MAGEA1P43355 309 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 GTF2A2P52657 109 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 MYL7Q01449 175 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 APBA1Q02410 837 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 EMC2Q15006 297 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 ASTE1Q2TB18 679 aaPredicted RBP18.98■□□□□ 0.63
VRK1-201ENST00000216639 DPY19L2P1Q6NXN4 242 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 RDH13Q8NBN7 331 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 SEPT1Q8WYJ6 367 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 ANKRD7Q92527 254 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 MAP7D2Q96T17 732 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 CBWD1Q9BRT8 395 aa18.98■□□□□ 0.63
VRK1-201ENST00000216639 NIFKQ9BYG3 293 aaKnown RBP18.98■□□□□ 0.63
VRK1-201ENST00000216639 POLR3FQ9H1D9 316 aaPredicted RBP18.98■□□□□ 0.63
VRK1-201ENST00000216639 RBAK-RBAKDNI3L0D1 243 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 TLR2O60603 784 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 GGPS1O95749 300 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 VAMP7P51809 220 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 GPRC5AQ8NFJ5 357 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 SLC7A3Q8WY07 619 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 CARD6Q9BX69 1037 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 XPNPEP1Q9NQW7 623 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 TRIM10Q9UDY6 481 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 FHOD1Q9Y613 1164 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 GSTTP1A0A1W2PQM5 241 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 EFCAB8A8MWE9 144 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 ZNF263O14978 683 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 P4HA2O15460 535 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 RFC5P40937 340 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 STAT5BP51692 787 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 EEPD1Q7L9B9 569 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 AFAP1L1Q8TED9 768 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 BSNDQ8WZ55 320 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 SECISBP2LQ93073 1101 aaKnown RBP18.97■□□□□ 0.63
VRK1-201ENST00000216639 FAM167AQ96KS9 214 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 LACRTQ9GZZ8 138 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 AZI2Q9H6S1 392 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 SIX2Q9NPC8 291 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 CDC23Q9UJX2 597 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 PPME1Q9Y570 386 aa18.97■□□□□ 0.63
VRK1-201ENST00000216639 MYH9P35579 1960 aaKnown RBP18.96■□□□□ 0.63
VRK1-201ENST00000216639 ASB14A6NK59 587 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 TRIM49P0CI25 452 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 TRIM49CP0CI26 452 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 ATP4AP20648 1035 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 RFX1P22670 979 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 ANXA13P27216 316 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 CNGA1P29973 690 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms