RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 SMAD5Q99717 465 aaKnown RBP11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 RSPH9Q9H1X1 276 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 RNF39Q9H2S5 420 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 SLC38A10Q9HBR0 1119 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 GGT7Q9UJ14 662 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 HACL1Q9UJ83 578 aa11.63□□□□□ -0.55
APOBEC3D-201ENST00000216099 RCCD1A6NED2 376 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 EML1O00423 815 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 FANCGO15287 622 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 TIMM44O43615 452 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 RNASEH2AO75792 299 aaKnown RBP11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 EGFRP00533 1210 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 HNRNPH3P31942 346 aaKnown RBP11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 PSMC6P62333 389 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZNF397Q8NF99 534 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 SVIPQ8NHG7 77 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 REEP2Q9BRK0 252 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 MXRA8Q9BRK3 442 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 JADE2Q9NQC1 790 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 BCS1LQ9Y276 419 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 SLC45A1Q9Y2W3 748 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 ARID2Q68CP9 1835 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 NPHP3-ACAD11A0A0J9YXS1 232 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 GAS7O60861 476 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 TGFB3P10600 412 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 TRIM21P19474 475 aaKnown RBP11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 PABPC4Q13310 644 aaKnown RBP eCLIP11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 EPHA7Q15375 998 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 WDR59Q6PJI9 974 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 CCDC170Q8IYT3 715 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 E2F7Q96AV8 911 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 UIMC1Q96RL1 719 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 TEKT3Q9BXF9 490 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 RBCK1Q9BYM8 510 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZNHIT6Q9NWK9 470 aaKnown RBP11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 KCND2Q9NZV8 630 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 PPP1R9AQ9ULJ8 1098 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 PRKAB1Q9Y478 270 aa11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 EPN1Q9Y6I3 576 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3D-201ENST00000216099 KIF5CO60282 957 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 KATNA1O75449 491 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 NDUFA10O95299 355 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 MCL1Q07820 350 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 SCYL3Q8IZE3 742 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 CELF2-AS1Q8N7Q2 184 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 AGBL1Q96MI9 1066 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 WDR24Q96S15 920 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 CFHR5Q9BXR6 569 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 OLFML3Q9NRN5 406 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 FAM184BQ9ULE4 1060 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 TRAF3IP3Q9Y228 551 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 PPP2R3BQ9Y5P8 575 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 UBE4BO95155 1302 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 TRAF5O00463 557 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 IL31Q6EBC2 164 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 SAMD7Q7Z3H4 446 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZNF577Q9BSK1 485 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 FGFBP2Q9BYJ0 223 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 TYW1Q9NV66 732 aaKnown RBP11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 OTOFQ9HC10 1997 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 A0A0G2JMZ2 1700 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 LCTP09848 1927 aa11.61□□□□□ -0.55
APOBEC3D-201ENST00000216099 EIF3DO15371 548 aaKnown RBP eCLIP11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 URI1O94763 535 aaPredicted RBP11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 SLITRK3O94933 977 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 VCAM1P19320 739 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 CYLC1P35663 651 aaPredicted RBP11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 ARHGAP25P42331 645 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 PPP2R3AQ06190 1150 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 PUS10Q3MIT2 529 aaKnown RBP11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 TBC1D10BQ4KMP7 808 aaPredicted RBP11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 PRPF38BQ5VTL8 546 aaKnown RBP11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 PCNX4Q63HM2 1172 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 SFR1Q86XK3 245 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 TRIM59Q8IWR1 403 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 ACRBPQ8NEB7 543 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 DYDC2Q96IM9 177 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 C12orf42Q96LP6 360 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 NACC1Q96RE7 527 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 CHP1Q99653 195 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 SEL1LQ9UBV2 794 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 UBIAD1Q9Y5Z9 338 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 EIF3CLB5ME19 914 aaKnown RBP11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 PDXKO00764 312 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 ZBED4O75132 1171 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 TBCAO75347 108 aaKnown RBP11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 LMNB1P20700 586 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 KLK7P49862 253 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 KRT83P78385 493 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 CYP4A11Q02928 519 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 NFIL3Q16649 462 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 KNOP1Q1ED39 458 aaKnown RBP11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 CCDC40Q4G0X9 1142 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 ARHGAP29Q52LW3 1261 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 RINT1Q6NUQ1 792 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 CHPFQ8IZ52 775 aa11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 EIF3CQ99613 913 aaKnown RBP11.6□□□□□ -0.55
APOBEC3D-201ENST00000216099 RUSC1Q9BVN2 902 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms