RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 OLIG1Q8TAK6 271 aa28.41■■■□□ 2.14
RTN4R-201ENST00000043402 TMEM174Q8WUU8 243 aa28.41■■■□□ 2.14
RTN4R-201ENST00000043402 GPRASP2Q96D09 838 aa28.41■■■□□ 2.14
RTN4R-201ENST00000043402 GPR88Q9GZN0 384 aa28.41■■■□□ 2.14
RTN4R-201ENST00000043402 INTS2Q9H0H0 1204 aaKnown RBP28.41■■■□□ 2.14
RTN4R-201ENST00000043402 DNAJC12Q9UKB3 198 aa28.41■■■□□ 2.14
RTN4R-201ENST00000043402 TELO2Q9Y4R8 837 aa28.41■■■□□ 2.14
RTN4R-201ENST00000043402 GRID2IPA4D2P6 1211 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 BTNL10A8MVZ5 291 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 SLC16A4O15374 487 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 EVI5O60447 810 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 TERF2Q15554 542 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 PKNOX2Q96KN3 472 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 MOV10L1Q9BXT6 1211 aaKnown RBP28.4■■■□□ 2.14
RTN4R-201ENST00000043402 STK33Q9BYT3 514 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 ST6GALNAC4Q9H4F1 302 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 ANKEF1Q9NU02 776 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 TCEAL9Q9UHQ7 104 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 ZMYND10O75800 440 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 STAT1P42224 750 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 MYL7Q01449 175 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 NLRX1Q86UT6 975 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 C12orf56Q8IXR9 622 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 MMGT1Q8N4V1 131 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 LMO3Q8TAP4 145 aa28.4■■■□□ 2.14
RTN4R-201ENST00000043402 POLR2AP24928 1970 aaKnown RBP28.39■■■□□ 2.14
RTN4R-201ENST00000043402 DDX3XO00571 662 aaKnown RBP eCLIP28.39■■■□□ 2.14
RTN4R-201ENST00000043402 KCNA2P16389 499 aa28.39■■■□□ 2.14
RTN4R-201ENST00000043402 FERP16591 822 aa28.39■■■□□ 2.14
RTN4R-201ENST00000043402 SOX5P35711 763 aa28.39■■■□□ 2.14
RTN4R-201ENST00000043402 DRAP1Q14919 205 aaPredicted RBP28.39■■■□□ 2.14
RTN4R-201ENST00000043402 ZNF746Q6NUN9 644 aaPredicted RBP28.39■■■□□ 2.14
RTN4R-201ENST00000043402 TIPINQ9BVW5 301 aa28.39■■■□□ 2.14
RTN4R-201ENST00000043402 TSKSQ9UJT2 592 aa28.39■■■□□ 2.14
RTN4R-201ENST00000043402 PCDHA10Q9Y5I2 948 aa28.39■■■□□ 2.14
RTN4R-201ENST00000043402 DOCK5Q9H7D0 1870 aa28.39■■■□□ 2.13
RTN4R-201ENST00000043402 ANXA13P27216 316 aa28.38■■■□□ 2.13
RTN4R-201ENST00000043402 NCKAP1LP55160 1127 aa28.38■■■□□ 2.13
RTN4R-201ENST00000043402 FAM102BQ5T8I3 360 aa28.38■■■□□ 2.13
RTN4R-201ENST00000043402 MEI1Q5TIA1 1274 aa28.38■■■□□ 2.13
RTN4R-201ENST00000043402 NSUN6Q8TEA1 469 aaKnown RBP28.38■■■□□ 2.13
RTN4R-201ENST00000043402 MS4A14Q96JA4 679 aa28.38■■■□□ 2.13
RTN4R-201ENST00000043402 SENP7Q9BQF6 1050 aa28.38■■■□□ 2.13
RTN4R-201ENST00000043402 CYP39A1Q9NYL5 469 aa28.38■■■□□ 2.13
RTN4R-201ENST00000043402 APEX2Q9UBZ4 518 aa28.38■■■□□ 2.13
RTN4R-201ENST00000043402 PACSIN2Q9UNF0 486 aaPredicted RBP28.38■■■□□ 2.13
RTN4R-201ENST00000043402 AFG3L2Q9Y4W6 797 aa28.38■■■□□ 2.13
RTN4R-201ENST00000043402 ATP2A1O14983 1001 aa28.38■■■□□ 2.13
RTN4R-201ENST00000043402 A1CFQ9NQ94 594 aaKnown RBP28.38■■■□□ 2.13
RTN4R-201ENST00000043402 HSPBP1Q9NZL4 362 aa28.38■■■□□ 2.13
RTN4R-201ENST00000043402 MAFGO15525 162 aa28.37■■■□□ 2.13
RTN4R-201ENST00000043402 ZNF862O60290 1169 aa28.37■■■□□ 2.13
RTN4R-201ENST00000043402 OAS2P29728 719 aaKnown RBP28.37■■■□□ 2.13
RTN4R-201ENST00000043402 PRKG1Q13976 671 aa28.37■■■□□ 2.13
RTN4R-201ENST00000043402 PHLDB3Q6NSJ2 640 aa28.37■■■□□ 2.13
RTN4R-201ENST00000043402 INTS8Q75QN2 995 aaKnown RBP28.37■■■□□ 2.13
RTN4R-201ENST00000043402 RDM1Q8NG50 284 aa28.37■■■□□ 2.13
RTN4R-201ENST00000043402 TEX13BQ9BXU2 312 aa28.37■■■□□ 2.13
RTN4R-201ENST00000043402 ZCCHC17Q9NP64 241 aaKnown RBP28.37■■■□□ 2.13
RTN4R-201ENST00000043402 PPP3CAQ08209 521 aa28.37■■■□□ 2.13
RTN4R-201ENST00000043402 CASP8Q14790 479 aa28.37■■■□□ 2.13
RTN4R-201ENST00000043402 C1orf220Q5T0J3 134 aa28.37■■■□□ 2.13
RTN4R-201ENST00000043402 LNX1Q8TBB1 728 aaPredicted RBP28.37■■■□□ 2.13
RTN4R-201ENST00000043402 GABBR1Q9UBS5 961 aa28.37■■■□□ 2.13
RTN4R-201ENST00000043402 EMSYQ7Z589 1322 aa28.36■■■□□ 2.13
RTN4R-201ENST00000043402 LRRN2O75325 713 aa28.36■■■□□ 2.13
RTN4R-201ENST00000043402 KRT13P13646 458 aa28.36■■■□□ 2.13
RTN4R-201ENST00000043402 VAMP7P51809 220 aa28.36■■■□□ 2.13
RTN4R-201ENST00000043402 CCDC181Q5TID7 509 aa28.36■■■□□ 2.13
RTN4R-201ENST00000043402 PLEKHO2Q8TD55 490 aa28.36■■■□□ 2.13
RTN4R-201ENST00000043402 HDAC7Q8WUI4 952 aa28.36■■■□□ 2.13
RTN4R-201ENST00000043402 LRRC1Q9BTT6 524 aa28.36■■■□□ 2.13
RTN4R-201ENST00000043402 SPDYE16A6NNV3 312 aaPredicted RBP28.35■■■□□ 2.13
RTN4R-201ENST00000043402 STBD1O95210 358 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 DNA2P51530 1060 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 XXYLT1Q8NBI6 393 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 SLC30A5Q8TAD4 765 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 KIFC3Q9BVG8 833 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 TMOD4Q9NZQ9 345 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 H3BQF6 201 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 POLR3GO15318 223 aaPredicted RBP28.35■■■□□ 2.13
RTN4R-201ENST00000043402 MYBL2P10244 700 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 MATR3P43243 847 aaKnown RBP eCLIP28.35■■■□□ 2.13
RTN4R-201ENST00000043402 NOL9Q5SY16 702 aaKnown RBP28.35■■■□□ 2.13
RTN4R-201ENST00000043402 DLK2Q6UY11 383 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 VPS36Q86VN1 386 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 TMEM161BQ8NDZ6 487 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 HINFPQ9BQA5 517 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 SYT11Q9BT88 431 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 ACAD9Q9H845 621 aa28.35■■■□□ 2.13
RTN4R-201ENST00000043402 LRRIQ3A6PVS8 624 aaPredicted RBP28.34■■■□□ 2.13
RTN4R-201ENST00000043402 MCM3P25205 808 aa28.34■■■□□ 2.13
RTN4R-201ENST00000043402 NPTX2P47972 431 aa28.34■■■□□ 2.13
RTN4R-201ENST00000043402 SOX10P56693 466 aa28.34■■■□□ 2.13
RTN4R-201ENST00000043402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.34■■■□□ 2.13
RTN4R-201ENST00000043402 ZBTB9Q96C00 473 aa28.34■■■□□ 2.13
RTN4R-201ENST00000043402 GOLPH3Q9H4A6 298 aa28.34■■■□□ 2.13
RTN4R-201ENST00000043402 PDE11AQ9HCR9 933 aa28.34■■■□□ 2.13
RTN4R-201ENST00000043402 ZHX1Q9UKY1 873 aaPredicted RBP28.34■■■□□ 2.13
RTN4R-201ENST00000043402 PAFAH1B1P43034 410 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms