RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Apol7eQ3UZ24 369 aa9.85□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Kctd19Q562E2 927 aa9.85□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Tlr13Q6R5N8 991 aa9.85□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Trpc5Q9QX29 975 aa9.85□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Gm8994E9PV04 411 aaKnown RBP9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Rad51ap2G3UW63 976 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 VdrP48281 422 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ccdc69Q3TCJ8 202 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Cnga4Q3UW12 575 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 OcrlQ6NVF0 900 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Lyve1Q8BHC0 318 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Uba6Q8C7R4 1053 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Chn1Q91V57 459 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Sytl1Q99N80 567 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Drap1Q9D6N5 205 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Rcan1Q9JHG6 198 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Klra17Q9JMA4 273 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Prdm2A2A7B5 1709 aaKnown RBP9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Cps1Q8C196 1500 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Qser1A2BIE1 1698 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Prl2c3P04768 224 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 HpdP49429 393 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Actn4P57780 912 aaKnown RBP9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Sesn2P58043 480 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Palb2Q3U0P1 1104 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Atp2a3Q64518 1038 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Adcy2Q80TL1 1090 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Gm4841E9QAA8 417 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Mcl1P97287 331 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ankrd45Q810N6 248 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Clasp2Q8BRT1 1286 aaKnown RBP9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 LzicQ8K3C3 190 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ndufv1Q91YT0 464 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ccdc130Q9D516 385 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 GgcxQ9QYC7 757 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ccnyl1D3YUJ3 367 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 March10E9PX79 788 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Mars2Q499X9 586 aaKnown RBP9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Kcna4Q61423 654 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Olfr832Q7TRG9 312 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Kctd3Q8BFX3 815 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ccdc68Q8BVC4 333 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Zcrb1Q9CZ96 217 aaKnown RBP9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Mrpl40Q9Z2Q5 206 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Nkx2-5P42582 318 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Gbp10Q000W5 611 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Arhgap44Q5SSM3 814 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Fam102bQ8BQS4 339 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Pfdn1Q9CWM4 122 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ccdc103Q9D9P2 237 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Zfyve19Q9DAZ9 389 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Pole3Q9JKP7 145 aa9.84□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Veph1A1A535 833 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Cyp4f40G3UW81 524 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 DffaO54786 331 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 IkbkbO88351 757 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Tmtc1Q3UV71 942 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Kdm7aQ3UWM4 940 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Smarca1Q6PGB8 1046 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Glis3Q6XP49 780 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Mrps22Q9CXW2 359 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Cog1Q9Z160 980 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Igsf9bE9PZ19 1328 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Heatr4E9Q357 955 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Akr1b1P45376 316 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Spata5Q3UMC0 893 aaKnown RBP9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Ttbk2Q3UVR3 1243 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Fnbp1Q80TY0 616 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Usp6nlQ80XC3 819 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Ubxn2aQ99KJ0 258 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Trip6Q9Z1Y4 480 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Pabpc1lA2A5N3 607 aaKnown RBP9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Acnat1A2AKK5 416 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 OatP29758 439 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 NficP70255 439 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 EgfrQ01279 1210 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Ppp1r13bQ62415 1087 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Dzip3Q7TPV2 1204 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Spats2lQ91WJ7 558 aaKnown RBP9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 4921524L21RikQ9D5T2 438 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Rhobtb1Q9DAK3 695 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Orc3Q9JK30 715 aaKnown RBP9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Dach1Q9QYB2 751 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Ubr1O70481 1757 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 MyocO70624 490 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Serpina1bP22599 413 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Zmym1Q3TJB1 983 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Luc7l3Q5SUF2 432 aaKnown RBP9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Rsad1Q5SUV1 442 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Ube3cQ80U95 1083 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Slc17a8Q8BFU8 601 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Plcb4Q91UZ1 1175 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 1700013H16RikQ9DAC5 291 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Strn3Q9ERG2 796 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Cpb2Q9JHH6 422 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Slc13a1Q9JHI4 594 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Psmg1Q9JK23 289 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Gm10354K7N6A0 256 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Cyp2d9P11714 504 aa9.83□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Tph1P17532 447 aa9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms