RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Spire2Q8K1S6 718 aa12.22□□□□□ -0.45
Lig1-211ENSMUST00000177588 Pcdhb3Q91XZ7 784 aa12.22□□□□□ -0.45
Lig1-211ENSMUST00000177588 Snx24Q9CRB0 169 aa12.22□□□□□ -0.45
Lig1-211ENSMUST00000177588 Llcfc1Q9D9P8 108 aa12.22□□□□□ -0.45
Lig1-211ENSMUST00000177588 Tlr2Q9QUN7 784 aa12.22□□□□□ -0.45
Lig1-211ENSMUST00000177588 Krt71Q9R0H5 524 aa12.22□□□□□ -0.45
Lig1-211ENSMUST00000177588 Dock2Q8C3J5 1828 aa12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 Krt36B1AQ75 473 aa12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 Mmrn1B2RPV6 1210 aa12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 Gm2030D3Z7C4 212 aa12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 Casp4P70343 373 aa12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 GclcP97494 637 aa12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 Ppp2r5eQ61151 467 aa12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 Trpm8Q8R4D5 1104 aa12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 Ctnnbl1Q9CWL8 563 aaKnown RBP12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 Cfap57Q9D180 1249 aa12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 SufuQ9Z0P7 484 aa12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 Psme4Q5SSW2 1843 aa12.21□□□□□ -0.45
Lig1-211ENSMUST00000177588 Col5a2Q3U962 1497 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 DtnbO70585 659 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Casp8O89110 480 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Nedd1P33215 660 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Syne3Q4FZC9 975 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Q8BGD0 127 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Ift74Q8BKE9 600 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Rassf9Q8K342 435 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Fam111aQ9D2L9 613 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Sf3a3Q9D554 501 aaKnown RBP12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Drap1Q9D6N5 205 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Ccdc182Q9D9C6 152 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Gtf2h1Q9DBA9 547 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Tfr2Q9JKX3 798 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Capn15Q9JLG8 1095 aa12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Zswim8Q3UHH1 1832 aaKnown RBP12.21□□□□□ -0.46
Lig1-211ENSMUST00000177588 Gm28360A0A087WR25 190 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Slc35g2D3YVE8 412 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Sclt1G5E861 688 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Krt8P11679 490 aaKnown RBP12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Slc8a1P70414 970 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Agbl1Q09M05 972 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 MlxipQ2VPU4 917 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Qrich1Q3UA37 777 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Eme2Q56A04 373 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Znf652Q5DU09 608 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Slc10a5Q5PT54 434 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Ppp1r11Q8K1L5 131 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 SfpqQ8VIJ6 699 aaKnown RBP12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Grhl1Q921D9 618 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Chchd3Q9CRB9 227 aaKnown RBP12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Cabp5Q9JLK3 173 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Drg2Q9QXB9 364 aaKnown RBP12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Gm45261A0A1B0GSP6 197 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Gm10110D3Z5M2 615 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Phactr1Q2M3X8 580 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Drc1Q3USS3 753 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Ccdc92bQ5SUE3 299 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Atp13a4Q5XF90 1193 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Llgl1Q80Y17 1036 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Armc6Q8BNU0 468 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Ces4aQ8R0W5 563 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Q9D5Q8 446 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Fthl17aQ9DAX0 182 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Scgb2b20Q9JI02 112 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Gm8298J3QPI0 401 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Chrm1P12657 460 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Rab21P35282 222 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Meis2P97367 477 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Kiaa1211Q5PR69 1207 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Tbc1d9bQ5SVR0 1263 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Uts2bQ765I1 113 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Tmc4Q7TQ65 694 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Ints2Q80UK8 1198 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 PolrmtQ8BKF1 1207 aaKnown RBP12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Efl1Q8C0D5 1127 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Bhmt2Q91WS4 363 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Q922C1 641 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Tacc3Q9JJ11 631 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Gys1Q9Z1E4 738 aaKnown RBP12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Usp31E9Q6Y8 1344 aa12.2□□□□□ -0.46
Lig1-211ENSMUST00000177588 Esr2O08537 530 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Tgfb2P27090 414 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Gspt2Q149F3 632 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 SpertQ32MG2 446 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 KhsrpQ3U0V1 748 aaKnown RBP12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 BC051142Q3V0M8 400 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Phf20Q8BLG0 1010 aaKnown RBP12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 PreplQ8C167 725 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Bcas3Q8CCN5 928 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Ccdc91Q9D8L5 442 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Casq2O09161 415 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Ncf1Q09014 390 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Ccdc84Q4VA36 332 aaKnown RBP12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Cnot7Q60809 285 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Scnn1aQ61180 699 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Krt12Q64291 487 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 CbarpQ66L44 698 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Gm2163Q6PCY5 473 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Unc5bQ8K1S3 945 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Gimap4Q99JY3 219 aa12.19□□□□□ -0.46
Lig1-211ENSMUST00000177588 Pstpip2Q99M15 334 aa12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms