RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Stk10O55098 966 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Klc1O88447 541 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Got1P05201 413 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 CatspereP0DP43 985 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 CnpP16330 420 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Acot6Q32Q92 419 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Gas7Q60780 421 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Pim2Q62070 370 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Msl1Q6PDM1 616 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 GmipQ6PGG2 971 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Q8BGC1 442 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Appl2Q8K3G9 662 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Fam171a1A2ATK9 892 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Gm2030D3Z7C4 212 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Hoxc13P50207 328 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Edem3Q2HXL6 931 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 HelqQ2VPA6 1069 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Ccdc84Q4VA36 332 aaKnown RBP12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Wdr44Q6NVE8 915 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Q8BGD0 127 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Slc9a9Q8BZ00 644 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Dph5Q9CWQ0 281 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 4921524L21RikQ9D5T2 438 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Gkap1Q9JMB0 366 aa12.55□□□□□ -0.4
Trim11-202ENSMUST00000108809 Vmn2r77L7N2B7 854 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Rnaseh1O70338 285 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 RxrbP28704 520 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 XdhQ00519 1335 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Rnf113a2Q14B01 337 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Vars2Q3U2A8 1060 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Cyfip2Q5SQX6 1253 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 ItgaeQ60677 1167 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Oca2Q62052 833 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Foxo6Q70KY4 559 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Brd2Q7JJ13 798 aaKnown RBP12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Erlin2Q8BFZ9 340 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Gprc5cQ8K3J9 440 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Pdxdc1Q99K01 787 aaKnown RBP12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Med24Q99K74 987 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Acsl3Q9CZW4 720 aaKnown RBP12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 IscuQ9D7P6 168 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 PlekQ9JHK5 350 aaKnown RBP12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Atp2c2A7L9Z8 944 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Gm38392E9Q2A2 434 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 MlxipQ2VPU4 917 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Vwa3aQ3UVV9 1148 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Klra6Q60653 266 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 HnrnpdQ60668 355 aaKnown RBP12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Ppp2r2aQ6P1F6 447 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Fmnl3Q6ZPF4 1028 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Slc12a8Q8VI23 705 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Scgb2b20Q9JI02 112 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Actn2Q9JI91 894 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Ttc13A0A1L1SSC7 844 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Csf1rP09581 977 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Tmod1P49813 359 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Tfe3Q64092 572 aaKnown RBP12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Sun2Q8BJS4 731 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Zhx2Q8C0C0 836 aaKnown RBP12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Rapgef5Q8C0Q9 814 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Bst2Q8R2Q8 172 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Arhgef25Q9CWR0 618 aa12.54□□□□□ -0.4
Trim11-202ENSMUST00000108809 Pdk4O70571 412 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 MyocO70624 490 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Ppp3caP63328 521 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Hnrnph2P70333 449 aaKnown RBP12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Shox2P70390 331 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Cracr2aQ3UP38 310 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 D630036H23RikQ3UQD6 204 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Zbtb7bQ64321 544 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Zbed4Q80WQ9 1168 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Q8C6G1 249 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Grhl1Q921D9 618 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Ttc5Q99LG4 440 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Tlr5Q9JLF7 859 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Tnip1Q9WUU8 647 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Mia3Q8BI84 1930 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Smchd1Q6P5D8 2007 aaKnown RBP12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Nova2D3YVV7 556 aaKnown RBP12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Heatr4E9Q357 955 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Etv6P97360 485 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Ice2Q3UZ18 988 aaKnown RBP12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Adad1Q5SUE7 619 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Ctc1Q5SUQ9 1212 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Tas2r134Q7TQB0 298 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Nucks1Q80XU3 234 aaKnown RBP12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Ppfia2Q8BSS9 1257 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Psma8Q9CWH6 250 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Cabp5Q9JLK3 173 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 PatjQ63ZW7 1834 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Hsf3D0VYS2 492 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Zfp266E9Q2S7 604 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Cep126Q0VBV7 1103 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Tex11Q14AT2 947 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Brd9Q3UQU0 596 aaKnown RBP12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Llgl1Q80Y17 1036 aa12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 SetQ9EQU5 289 aaKnown RBP12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Drg2Q9QXB9 364 aaKnown RBP12.53□□□□□ -0.4
Trim11-202ENSMUST00000108809 Atrnl1Q6A051 1378 aa12.52□□□□□ -0.4
Trim11-202ENSMUST00000108809 Pex5O09012 639 aa12.52□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms