RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Pacsin1Q61644 441 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Znf12Q7TSI0 686 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 BC048507Q80ZS7 89 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Trim65Q8BFW4 522 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pak4Q8BTW9 593 aa9.97□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 CatspereP0DP43 985 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pfdn4Q3UWL8 134 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cfap52Q5F201 620 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Hif1aQ61221 836 aaKnown RBP9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Dnajc6Q80TZ3 938 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 TxlngQ8BHN1 524 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 OtoaQ8K561 1137 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 PlvapQ91VC4 438 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 CtsqQ91ZF4 343 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Eif4enif1Q9EST3 983 aaKnown RBP9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Rnf4Q9QZS2 194 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Iqcj-Schip1A0A088MLT8 559 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 KitP05532 979 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Schip1P0DPB4 484 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ccdc138Q0VF22 680 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pla2g4eQ50L42 875 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Krt31Q61765 416 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Zbtb39Q6PDK0 712 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Spata32Q8C5V0 334 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 HibchQ8QZS1 385 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 RpainQ9CWY9 219 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cul4bA2A432 970 aaKnown RBP9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Zmynd8A2A484 1235 aaKnown RBP9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Znf148Q61624 794 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Spice1Q8C804 860 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 FtcdQ91XD4 541 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Snx2Q9CWK8 519 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ttc33Q9D6K7 262 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tmod3Q9JHJ0 352 aa9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Usp14Q9JMA1 493 aaKnown RBP9.96□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Olfr310B2RVZ1 332 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Gm3182K7N6T8 263 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Sash1P59808 1230 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Frmd8Q3UFK8 466 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Sdf4Q61112 361 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Itih1Q61702 907 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Osbpl2Q8BX94 484 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Pnpt1Q8K1R3 783 aaKnown RBP9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Slc12a6Q924N4 1150 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 NonoQ99K48 473 aaKnown RBP9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Psmd9Q9CR00 222 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Uhrf1bp1B2KF50 1429 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Prl3b1P09586 222 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Kcnb1Q03717 857 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Zcwpw1Q6IR42 630 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Zfp418Q8BFS8 652 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Trpa1Q8BLA8 1125 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Plekha5E9Q6H8 1269 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Nccrp1G3X9C2 266 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Hspa4lP48722 838 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Gpr162Q3UN16 588 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Trim75Q3UWZ0 467 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Ece1Q4PZA2 769 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Serpina3bQ8BYY9 420 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Sugt1Q9CX34 336 aa9.96□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 E2f6O54917 272 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Fam167bP17257 162 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 YwhahP68510 246 aaKnown RBP9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 NficP70255 439 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Col6a1Q04857 1025 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Zfp341Q6PGC9 846 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 TbckQ8BM85 762 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Ccdc90bQ8C3X2 256 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Pnma3Q8JZW8 466 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Adi1Q99JT9 179 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 LrgukQ9D5S7 820 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Top3aO70157 1003 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Kdm7aQ3UWM4 940 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Ccdc185Q3V118 621 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Nlrp4aQ8BU40 982 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 CerkQ8K4Q7 531 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Abcg8Q9DBM0 673 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Itga2bQ9QUM0 1033 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Nme9A0A1L1SUL6 329 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Zfp558E9Q1J0 407 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Mucl2P02815 138 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Lzts1P60853 599 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Foxred2Q3USW5 665 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Arhgap44Q5SSM3 814 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Wbp4Q61048 376 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Atp6v0d2Q80SY3 350 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 PreplQ8C167 725 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Nmrk1Q91W63 195 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 IkbipQ9DBZ1 373 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Adrm1Q9JKV1 407 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Rasgrp1Q9Z1S3 795 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Zc3h4Q6ZPZ3 1304 aaKnown RBP9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Usp35M0QWN7 1009 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 DtnbO70585 659 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Celf1P28659 486 aaKnown RBP9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Atp11aP98197 1187 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Dennd2cQ6P9P8 914 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Rhot1Q8BG51 631 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Psmd5Q8BJY1 504 aa9.95□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Fgfr1op2Q9CRA9 253 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms