RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 LnpkQ7TQ95 425 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Lrrc4cQ8C031 640 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Bcas3Q8CCN5 928 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Tti1Q91V83 1085 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Nop56Q9D6Z1 580 aaKnown RBP11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Gm45194A0A140LJG2 572 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 PtenO08586 403 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Pon1P52430 355 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Lrrn4P59383 733 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Slc10a4Q3UEZ8 437 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 GmncQ3URY2 333 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Trim65Q8BFW4 522 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Trpm8Q8R4D5 1104 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Nmrk1Q91W63 195 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Sdr42e1Q9D665 394 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Tlr2Q9QUN7 784 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Pdcd7Q9WTY1 482 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Ccdc88aQ5SNZ0 1873 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Agxt2Q3UEG6 513 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Prr18Q6PAN7 307 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Atxn2lQ7TQH0 1049 aaKnown RBP11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 DcakdQ8BHC4 231 aaKnown RBP11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Hook3Q8BUK6 718 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Fam118bQ8C569 351 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Usp20Q8C6M1 916 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Zfp449Q8CB76 518 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Abcf3Q8K268 709 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Ces4aQ8R0W5 563 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Pdxdc1Q99K01 787 aaKnown RBP11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Slc5a5Q99PN0 618 aa11.13□□□□□ -0.63
Trim17-201ENSMUST00000047697 Ccdc88cQ6VGS5 2009 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 4933406M09RikG3XA12 479 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 TyrobpO54885 114 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Wfs1P56695 890 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Ddr1Q03146 911 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Gspt2Q149F3 632 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Ksr1Q61097 873 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Ugt1a9Q62452 528 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Zdhhc24Q6IR37 284 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Gga2Q6P5E6 603 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Slc51aQ8R000 340 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Dqx1Q924H9 718 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 IdeQ9JHR7 1019 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Rfwd2Q9R1A8 733 aaKnown RBP11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Rps6ka4Q9Z2B9 773 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Tmem120bQ3TA38 339 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Pla2g4eQ50L42 875 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 PrimpolQ6P1E7 537 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Rnaseh2bQ80ZV0 308 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Mageb18Q8BQR7 327 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Nudt12Q9DCN1 462 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 NagaQ9QWR8 415 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Noc2lQ9WV70 747 aaKnown RBP11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Rasgrp1Q9Z1S3 795 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Pitpnm2Q6ZPQ6 1335 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Zc3h7bF8VPP8 982 aaKnown RBP11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Zfyve27Q3TXX3 415 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 HnrnpdQ60668 355 aaKnown RBP11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 P4ha1Q60715 534 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Tas2r134Q7TQB0 298 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Ms4a5Q810P8 197 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Cyp26b1Q811W2 512 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 3830417A13RikQ8BQJ2 303 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Calhm6Q8C9E8 313 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Cwf19l1Q8CI33 537 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Amhr2Q8K592 568 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Vps36Q91XD6 386 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Q91Z58 1206 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Xab2Q9DCD2 855 aaKnown RBP11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Jag1Q9QXX0 1218 aa11.12□□□□□ -0.63
Trim17-201ENSMUST00000047697 Usp31E9Q6Y8 1344 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Gm15262A0A140LIQ5 728 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Apol8A2VDH7 339 aaKnown RBP11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Trappc11B2RXC1 1133 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Gm1661E9Q963 441 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 RpsaP14206 295 aaKnown RBP11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Znf367Q0VDT2 340 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 KhsrpQ3U0V1 748 aaKnown RBP11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Ccdc84Q4VA36 332 aaKnown RBP11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Dph1Q5NCQ5 438 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 ChukQ60680 745 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Nlrp14Q6B966 993 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Efl1Q8C0D5 1127 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Trim47Q8C0E3 641 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Ccdc134Q8C7V8 229 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Bhmt2Q91WS4 363 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Igf2bp3Q9CPN8 579 aaKnown RBP11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Riok3Q9DBU3 519 aaKnown RBP11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 IkbipQ9DBZ1 373 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Rbm6S4R1W5 1118 aaKnown RBP11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Zfy1P10925 782 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Fbln1Q08879 705 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Sec23ipQ6NZC7 998 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Rhbdf1Q6PIX5 856 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Fmnl3Q6ZPF4 1028 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Q8BGD0 127 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Trmt2aQ8BNV1 574 aaKnown RBP11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Cfap36Q8C6E0 343 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Pkn3Q8K045 878 aa11.11□□□□□ -0.63
Trim17-201ENSMUST00000047697 Ppp1r11Q8K1L5 131 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms