RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Tbc1d30Q69ZT9 766 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 OcrlQ6NVF0 900 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 SpidrQ8BGX7 933 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Trmt2aQ8BNV1 574 aaKnown RBP10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cep95Q8BVV7 827 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Ppm1kQ8BXN7 372 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Syne4Q8CII8 388 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Dhx58Q99J87 678 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Sytl1Q99N80 567 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Gtf3c6Q9D8P7 227 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Pck1Q9Z2V4 622 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Nav1Q8CH77 1875 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tnip3A0A1D5RMN0 279 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Pabpc1lA2A5N3 607 aaKnown RBP10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Trim72Q1XH17 477 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Otud5Q3U2S4 566 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cog7Q3UM29 770 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Ice2Q3UZ18 988 aaKnown RBP10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Coa7Q921H9 231 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tnfrsf10bQ9QZM4 381 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 AtrnQ9WU60 1428 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Ttc38A3KMP2 465 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Drp2Q05AA6 957 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 TwistnbQ78WZ7 330 aaKnown RBP10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Srrm3Q80WV7 648 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 AsphQ8BSY0 741 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tldc1Q8K0P3 455 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Eps8l1Q8R5F8 716 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Pcdhb12Q91Y07 789 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Aipl1Q924K1 328 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Zfyve19Q9DAZ9 389 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 PigoQ9JJI6 1093 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 GgcxQ9QYC7 757 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Pdcd7Q9WTY1 482 aa10.62□□□□□ -0.71
Ldlr-201ENSMUST00000034713 StrnO55106 780 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Slurp2P0DP59 97 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Mylk3Q3UIZ8 795 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cnksr2Q80YA9 1032 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tmem39bQ810L4 492 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Pnpt1Q8K1R3 783 aaKnown RBP10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Stard7Q8R1R3 373 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Setd3Q91WC0 594 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Q922C1 641 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cmtr1Q9DBC3 837 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Xab2Q9DCD2 855 aaKnown RBP10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Sgpp1Q9JI99 430 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Lgr5Q9Z1P4 907 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Prss40A6H6T1 365 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Rexo5D3YW29 759 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Zfp839E9PUU5 921 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Trim5E9PV98 497 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Plekha5E9Q6H8 1269 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cyp2d9P11714 504 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 CebpaP53566 359 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 EsrrgP62509 458 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cyp11b1Q3TG86 501 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Tmprss11aQ3UQ41 389 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cage1Q5IR70 849 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Pla2g4cQ64GA5 597 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Serpinb3dQ6UKZ0 387 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Actn1Q7TPR4 892 aaKnown RBP10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 SrlQ7TQ48 910 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Mtrf1lQ8BJU9 373 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Leng8Q8CBY3 785 aaKnown RBP10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Q8VDP2 222 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Slc26a4Q9R155 780 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 1700003F12RikA2AKE5 210 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 6030498E09RikB1AX85 169 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Slc3a2P10852 526 aaKnown RBP10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Gsdmc4Q3TR54 480 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 GmncQ3URY2 333 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Parp10Q8CIE4 960 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cdk17Q8K0D0 523 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Prpf6Q91YR7 941 aaKnown RBP10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Nde1Q9CZA6 344 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Thumpd2Q9CZB3 528 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Col18a1P39061 1774 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Ahnak2E9PYB0 1738 aaKnown RBP10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Gli3Q61602 1583 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Trappc11B2RXC1 1133 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Adcy7P51829 1099 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Crnkl1P63154 690 aaKnown RBP10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Gcnt1Q09324 428 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Aak1Q3UHJ0 959 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 D630036H23RikQ3UQD6 204 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 ChukQ60680 745 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 HarsQ61035 509 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Trim17Q7TPM3 477 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 C2cd5Q7TPS5 1016 aaKnown RBP10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Sox30Q8CGW4 782 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Cacnb1Q8R3Z5 597 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Spon1Q8VCC9 807 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Dnajc3Q91YW3 504 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Rbp7Q9EPC5 134 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Trp53inp1Q9QXE4 239 aa10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Zranb2Q9R020 330 aaKnown RBP10.61□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Stat3P42227 770 aaKnown RBP10.6□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Slc1a1P51906 523 aa10.6□□□□□ -0.71
Ldlr-201ENSMUST00000034713 GabpaQ00422 454 aa10.6□□□□□ -0.71
Ldlr-201ENSMUST00000034713 Ttbk2Q3UVR3 1243 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms