RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Rsad2Q8CBB9 362 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Tti1Q91V83 1085 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Tlr9Q9EQU3 1032 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Nup98Q6PFD9 1816 aaKnown RBP11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Gm5737A0A140LI11 423 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Nup62clA2AG10 272 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Cfap221A9Q751 836 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Sema3eP70275 775 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Ncf1Q09014 390 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Gspt2Q149F3 632 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Nlrp4cQ3TKR3 982 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Mier3Q3UHF3 551 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Dph1Q5NCQ5 438 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Nlrp4fQ66X05 959 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Klhl29Q80T74 875 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Rab44Q8CB87 725 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Amhr2Q8K592 568 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Tjap1Q9DCD5 539 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Cse1lQ9ERK4 971 aaKnown RBP11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Rps6ka4Q9Z2B9 773 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Gm5936A2BG95 728 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Gm5640A3KG49 728 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Zc3h7bF8VPP8 982 aaKnown RBP11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 PtenO08586 403 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 AfpP02772 605 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Cdc25aP48964 514 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Mybl1P51960 751 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Creb1Q01147 341 aaKnown RBP11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Rgs9bpQ148R9 237 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Chrna5Q2MKA5 467 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 WaplQ65Z40 1200 aaKnown RBP11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Kcnt1Q6ZPR4 1224 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 DcakdQ8BHC4 231 aaKnown RBP11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Ccdc40Q8BI79 1192 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 C130026I21RikQ8C898 291 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Pop1Q8K205 1045 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Gpsm2Q8VDU0 679 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Zcchc8Q9CYA6 709 aaKnown RBP11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Akt1s1Q9D1F4 257 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Cpb2Q9JHH6 422 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Krt17Q9QWL7 433 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Duox1A2AQ92 1551 aa11.12□□□□□ -0.63
Clip3-201ENSMUST00000014065 Lrrc74aA0A1Y7VMD6 494 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Mybl2P48972 704 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Ddr1Q03146 911 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 SpertQ32MG2 446 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Rasa3Q60790 834 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Six2Q62232 296 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Zic5Q7TQ40 622 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Pja2Q80U04 707 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 3830417A13RikQ8BQJ2 303 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 PreplQ8C167 725 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Kat5Q8CHK4 513 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Slc26a6Q8CIW6 758 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Oxnad1Q8VE38 311 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Bag2Q91YN9 210 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Gucy1a3Q9ERL9 691 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Prkab1Q9R078 270 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Taok1Q5F2E8 1001 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 HnrnpdQ60668 355 aaKnown RBP11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Gas7Q60780 421 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Ppp1r1bQ60829 194 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Prr18Q6PAN7 307 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Ints8Q80V86 995 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Epc2Q8C0I4 808 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Ccdc134Q8C7V8 229 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Pkn3Q8K045 878 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 MesdQ9ERE7 224 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Slc26a4Q9R155 780 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Rasgrp1Q9Z1S3 795 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Lactbl1S4R213 581 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Lrp5Q91VN0 1614 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 4930502E18RikQ14BQ3 236 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Rsad1Q5SUV1 442 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Dlg4Q62108 724 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Retreg2Q6NS82 541 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Nap1l4Q78ZA7 375 aaKnown RBP11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Ms4a5Q810P8 197 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Cyp2d26Q8CIM7 500 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Appl2Q8K3G9 662 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 St5Q924W7 1134 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Ttc5Q99LG4 440 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Golga1Q9CW79 758 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Mageb16Q9CWV4 363 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Bcl2l12Q9D3J3 255 aa11.11□□□□□ -0.63
Clip3-201ENSMUST00000014065 Flt1P35969 1333 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Gm45194A0A140LJG2 572 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Etv6P97360 485 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Meis2P97367 477 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 GmncQ3URY2 333 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Rhox12Q4TU81 186 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Nlrp14Q6B966 993 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Rnaseh2bQ80ZV0 308 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Kctd6Q8BNL5 237 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Cpa5Q8R4H4 436 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Yipf1Q91VU1 306 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Riok3Q9DBU3 519 aaKnown RBP11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Nudt12Q9DCN1 462 aa11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Ybx3Q9JKB3 361 aaKnown RBP11.1□□□□□ -0.63
Clip3-201ENSMUST00000014065 Tlr2Q9QUN7 784 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms