RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Nap1l5Q9JJF0 156 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gm45194A0A140LJG2 572 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gm5814J3QP80 125 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Cracr2aQ3UP38 310 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Serpinb1cQ5SV42 375 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Brip1Q5SXJ3 1174 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Galnt17Q7TT15 598 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Scfd2Q8BTY8 684 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ttc16Q8C1F5 767 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 P3h4Q8K2B0 443 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Mrfap1Q9CQL7 125 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Cog1Q9Z160 980 aa17.51■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gm3127E9Q9P5 263 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gm3453K7N724 263 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 OatP29758 439 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Trmt1Q3TX08 663 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Yipf3Q3UDR8 347 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Dph1Q5NCQ5 438 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ptger2Q62053 362 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Tmem132dQ76HP3 1097 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 AagabQ8R2R3 316 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Mcur1Q9CXD6 340 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Magea10A2AMW4 325 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Klc1O88447 541 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Prkg1P0C605 671 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Pstpip1P97814 415 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ccdc92bQ5SUE3 299 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Trim65Q8BFW4 522 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Il17cQ8K4C5 194 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Slc18a1Q8R090 521 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Slc14a1Q8VHL0 384 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ccdc182Q9D9C6 152 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Cul1Q9WTX6 776 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Nup188Q6ZQH8 1759 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Usp34Q6ZQ93 3582 aa17.5■□□□□ 0.39
Trim28-201ENSMUST00000005705 Apba1B2RUJ5 842 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 DgkhD3YXJ0 1156 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Epha3P29319 983 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Map2k1P31938 393 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Siah1bQ06985 282 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ppm1fQ8CGA0 452 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Calml4Q91WQ9 153 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Slc25a38Q91XD8 326 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Scgb2b7D3YYY1 112 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Apol10bG3X9K7 334 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gm6121L7MUF1 212 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Mybl1P51960 751 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Mcl1P97287 331 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ksr1Q61097 873 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Stk38lQ7TSE6 464 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Depdc1bQ8BH88 529 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Zhx2Q8C0C0 836 aaKnown RBP17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ccdc28aQ8CEI3 192 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Nxf1Q99JX7 618 aaKnown RBP17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Prdm11A2AGX3 565 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Pik3caP42337 1068 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Rhbdf1Q6PIX5 856 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Srrm3Q80WV7 648 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Iffo1Q8BXL9 562 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Prpf4Q9DAW6 521 aaKnown RBP17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Uchl3Q9JKB1 230 aa17.49■□□□□ 0.39
Trim28-201ENSMUST00000005705 Mtcl1Q3UHU5 1945 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Slc35g2D3YVE8 412 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gm8994E9PV04 411 aaKnown RBP17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Adcy7P51829 1099 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Rasa2P58069 847 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Znf367Q0VDT2 340 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Trim80Q3V061 624 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Naif1Q6PFD7 327 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Shtn1Q8K2Q9 631 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Psmd2Q8VDM4 908 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Tfr2Q9JKX3 798 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Znf394Q9Z1D9 521 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gm4985A2ALC6 410 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gm3095E9Q058 166 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gm1661E9Q963 441 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Casp8O89110 480 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Becn2P0DM65 447 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Hoxa11P31311 313 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 HalP35492 657 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Scnn1aQ61180 699 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ssxb10Q6XAR7 170 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Rps6ka6Q7TPS0 764 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Champ1Q8K327 802 aaKnown RBP17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Q91Z58 1206 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ccdc124Q9D8X2 217 aaKnown RBP17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 1700109H08RikQ9D9C0 210 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 MesdQ9ERE7 224 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gon4lQ9DB00 2260 aa17.48■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ifi207E9Q3L4 978 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Myo1eE9Q634 1107 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 EporP14753 507 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Kif5cP28738 956 aaKnown RBP17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Rrp36Q3UFY0 244 aaKnown RBP17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ints2Q80UK8 1198 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Cnot10Q8BH15 744 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Bicd1Q8BR07 835 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Rbm41Q8JZV4 413 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Xpo6Q924Z6 1125 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Tdrd12Q9CWU0 1215 aa17.47■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms