RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Ppm1kQ8BXN7 372 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Fam204aQ8C6C7 236 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Tti1Q91V83 1085 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Igf2bp3Q9CPN8 579 aaKnown RBP13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 TarsQ9D0R2 722 aaKnown RBP13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rsph3bQ9DA80 389 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Cyp2s1Q9DBX6 501 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Orc3Q9JK30 715 aaKnown RBP13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Pcsk1nQ9QXV0 258 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Tcp11x2A2AEI7 503 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Pid1Q3UBG2 217 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Ints2Q80UK8 1198 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Crybg3Q80W49 1005 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Dlg1Q811D0 905 aaKnown RBP13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Gbp9Q8BTS3 619 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 RadxQ8C779 850 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 4930519G04RikQ9CPT7 205 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Grtp1Q9D3N8 359 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Uchl3Q9JKB1 230 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 H2-OaQ9QWV1 250 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Psmd10Q9Z2X2 231 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Serpinb6cW4VSP4 379 aa13.68□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Myh1Q5SX40 1942 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Axin2O88566 840 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Sept2P42208 361 aaKnown RBP13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Nsun7Q14AW5 724 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Tmed8Q3UHI4 326 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Tfcp2l1Q3UNW5 479 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Gm5168Q4KL04 211 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Ppp1r13bQ62415 1087 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Ankfy1Q810B6 1169 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Enoph1Q8BGB7 257 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 HibchQ8QZS1 385 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Slc13a1Q9JHI4 594 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Usp14Q9JMA1 493 aaKnown RBP13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Hsf3D0VYS2 492 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Cd44P15379 778 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Tmem120bQ3TA38 339 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Krt35Q497I4 455 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rhox12Q4TU81 186 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Atp13a4Q5XF90 1193 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Pop1Q8K205 1045 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 MlphQ91V27 590 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 4921524L21RikQ9D5T2 438 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rasgrf1P27671 1262 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Trmt1Q3TX08 663 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Adad1Q5SUE7 619 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Stambpl1Q76N33 436 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 WhrnQ80VW5 918 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Prl7b1Q8CGZ9 251 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Msantd4Q91YU3 345 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 PccaQ91ZA3 724 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Pls3Q99K51 630 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Llcfc1Q9D9P8 108 aa13.67□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rcn1Q05186 325 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rpusd2Q149F1 553 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Klra5Q60652 266 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Ankzf1Q80UU1 748 aaKnown RBP13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Kremen1Q99N43 473 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Ttc17E9PVB5 1198 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Cyp11b2P15539 500 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Usp4P35123 962 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 RelaQ04207 549 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Xlr3bQ6P205 226 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Ssxb10Q6XAR7 170 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 GanQ8CA72 597 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Btbd7Q8CFE5 1130 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Cwf19l1Q8CI33 537 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Lztr1Q9CQ33 837 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Pgm1Q9D0F9 562 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Xab2Q9DCD2 855 aaKnown RBP13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Trpc3Q9QZC1 836 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Prkab1Q9R078 270 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Col3a1P08121 1464 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 NfixP70257 488 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Snai1Q02085 264 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rasip1Q3U0S6 961 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Wnk4Q80UE6 1222 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rbbp5Q8BX09 538 aaKnown RBP13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Ttc16Q8C1F5 767 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rbm31yQ9D3U4 565 aa13.66□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Serpinb8O08800 374 aaKnown RBP13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Map3k9Q3U1V8 1077 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Trpa1Q8BLA8 1125 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 PdxkQ8K183 312 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rpap2Q8VC34 614 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Syngap1F6SEU4 1340 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Sh2d4bA6X942 431 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Gm28043E0CXC2 719 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Scp2P32020 547 aaKnown RBP13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Sesn2P58043 480 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Gdf10P97737 476 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Luc7l3Q5SUF2 432 aaKnown RBP13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 ChukQ60680 745 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Mrgprx1Q8CIP3 322 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Rabep2Q91WG2 554 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Vwa5aQ99KC8 793 aaKnown RBP13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Bcs1lQ9CZP5 418 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Sept6Q9R1T4 434 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Mtmr2Q9Z2D1 643 aa13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 39.4 ms