RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	TDA6	Q06466	467 aa		3.74	□□□□□ -1.81
RLM1	YPL089C	YPR148C	Q06523	435 aa		3.74	□□□□□ -1.81
RLM1	YPL089C	RQC2	Q12532	1038 aa	Known RBP	3.74	□□□□□ -1.81
RLM1	YPL089C	MAK21	Q12176	1025 aa	Known RBP	3.73	□□□□□ -1.81
RLM1	YPL089C	ADE12	P80210	433 aa	Known RBP	3.72	□□□□□ -1.81
RLM1	YPL089C	CEM1	P39525	442 aa		3.71	□□□□□ -1.81
RLM1	YPL089C	YPL034W	Q03083	165 aa		3.71	□□□□□ -1.82
RLM1	YPL089C	CLB5	P30283	435 aa		3.7	□□□□□ -1.82
RLM1	YPL089C	SAS10	Q12136	610 aa	Predicted RBP	3.7	□□□□□ -1.82
RLM1	YPL089C	SBE2	P42223	864 aa	Known RBP	3.7	□□□□□ -1.82
RLM1	YPL089C	VPS70	P47161	811 aa		3.69	□□□□□ -1.82
RLM1	YPL089C	ALR1	Q08269	859 aa		3.69	□□□□□ -1.82
RLM1	YPL089C	COX6	P00427	148 aa		3.68	□□□□□ -1.82
RLM1	YPL089C	YNR014W	P53719	212 aa		3.67	□□□□□ -1.82
RLM1	YPL089C	NAM8	Q00539	523 aa	Known RBP	3.67	□□□□□ -1.82
RLM1	YPL089C	YBL086C	P38177	466 aa		3.66	□□□□□ -1.82
RLM1	YPL089C	CDC19	P00549	500 aa	Known RBP	3.66	□□□□□ -1.82
RLM1	YPL089C	CKB1	P43639	278 aa		3.66	□□□□□ -1.82
RLM1	YPL089C	CUZ1	P53899	274 aa		3.66	□□□□□ -1.82
RLM1	YPL089C	MCX1	P38323	520 aa	Predicted RBP	3.65	□□□□□ -1.82
RLM1	YPL089C	AMN1	P38285	549 aa	Predicted RBP	3.65	□□□□□ -1.83
RLM1	YPL089C	RPA14	P50106	137 aa		3.65	□□□□□ -1.83
RLM1	YPL089C	TBF1	Q02457	562 aa		3.64	□□□□□ -1.83
RLM1	YPL089C	LSB6	P42951	607 aa		3.63	□□□□□ -1.83
RLM1	YPL089C	YPR097W	Q06839	1073 aa		3.62	□□□□□ -1.83
RLM1	YPL089C	PBS2	P08018	668 aa		3.6	□□□□□ -1.83
RLM1	YPL089C	YCK2	P23292	546 aa	Known RBP	3.6	□□□□□ -1.83
RLM1	YPL089C	PSE1	P32337	1089 aa	Known RBP	3.6	□□□□□ -1.83
RLM1	YPL089C	YDL206W	Q12424	762 aa		3.6	□□□□□ -1.83
RLM1	YPL089C	SIT4	P20604	311 aa		3.59	□□□□□ -1.83
RLM1	YPL089C	YMR265C	Q03508	461 aa	Known RBP	3.59	□□□□□ -1.83
RLM1	YPL089C	YDR215C	Q12240	137 aa		3.59	□□□□□ -1.83
RLM1	YPL089C	OMA1	P36163	345 aa		3.58	□□□□□ -1.84
RLM1	YPL089C	TAT1	P38085	619 aa		3.58	□□□□□ -1.84
RLM1	YPL089C	DSF2	P38213	736 aa		3.58	□□□□□ -1.84
RLM1	YPL089C	ALO1	P54783	526 aa	Known RBP	3.58	□□□□□ -1.84
RLM1	YPL089C	SPB4	P25808	606 aa	Predicted RBP	3.57	□□□□□ -1.84
RLM1	YPL089C	BOI2	P39969	1040 aa		3.57	□□□□□ -1.84
RLM1	YPL089C	SYT1	Q06836	1226 aa		3.57	□□□□□ -1.84
RLM1	YPL089C	SLY41	P22215	453 aa		3.56	□□□□□ -1.84
RLM1	YPL089C	MCA1	Q08601	432 aa		3.56	□□□□□ -1.84
RLM1	YPL089C	GLT1	Q12680	2145 aa	Known RBP	3.56	□□□□□ -1.84
RLM1	YPL089C	SLN1	P39928	1220 aa	Predicted RBP	3.56	□□□□□ -1.84
RLM1	YPL089C	PUS6	P53294	404 aa		3.56	□□□□□ -1.84
RLM1	YPL089C	MAM3	Q12296	706 aa		3.55	□□□□□ -1.84
RLM1	YPL089C	APP1	P53933	587 aa		3.54	□□□□□ -1.84
RLM1	YPL089C	VTC4	P47075	721 aa		3.54	□□□□□ -1.84
RLM1	YPL089C	AVT1	P47082	602 aa		3.54	□□□□□ -1.84
RLM1	YPL089C	DIT1	P21623	536 aa		3.53	□□□□□ -1.84
RLM1	YPL089C	NUP42	P49686	430 aa	Known RBP	3.53	□□□□□ -1.84
RLM1	YPL089C	DFG5	Q05031	458 aa		3.53	□□□□□ -1.84
RLM1	YPL089C	KRE33	P53914	1056 aa	Known RBP	3.53	□□□□□ -1.84
RLM1	YPL089C	VAC17	P25591	423 aa		3.52	□□□□□ -1.85
RLM1	YPL089C	MKS1	P34072	584 aa		3.52	□□□□□ -1.85
RLM1	YPL089C	MET1	P36150	593 aa		3.52	□□□□□ -1.85
RLM1	YPL089C	IES2	P40154	320 aa		3.52	□□□□□ -1.85
RLM1	YPL089C	EMW1	P42842	904 aa	Known RBP	3.52	□□□□□ -1.85
RLM1	YPL089C	YDR461C-A	Q2V2P7	80 aa		3.52	□□□□□ -1.85
RLM1	YPL089C	DIT2	P21595	489 aa		3.51	□□□□□ -1.85
RLM1	YPL089C	BDS1	Q08347	646 aa		3.51	□□□□□ -1.85
RLM1	YPL089C	INP52	P50942	1183 aa		3.49	□□□□□ -1.85
RLM1	YPL089C	TEA1	P47988	759 aa		3.48	□□□□□ -1.85
RLM1	YPL089C	YMR196W	Q04336	1088 aa		3.48	□□□□□ -1.85
RLM1	YPL089C	NIS1	P53939	407 aa		3.47	□□□□□ -1.85
RLM1	YPL089C	GIS1	Q03833	894 aa		3.47	□□□□□ -1.85
RLM1	YPL089C	LEU3	P08638	886 aa		3.46	□□□□□ -1.86
RLM1	YPL089C	DAL1	P32375	460 aa		3.46	□□□□□ -1.86
RLM1	YPL089C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.46	□□□□□ -1.86	not detected
RLM1	YPL089C	UBP15	P50101	1230 aa		3.46	□□□□□ -1.86
RLM1	YPL089C	YNR021W	P53723	404 aa	Known RBP	3.46	□□□□□ -1.86
RLM1	YPL089C	GPM1	P00950	247 aa	Known RBP	3.46	□□□□□ -1.86
RLM1	YPL089C	TRM1	P15565	570 aa	Known RBP	3.46	□□□□□ -1.86
RLM1	YPL089C	AOS1	Q06624	347 aa		3.46	□□□□□ -1.86
RLM1	YPL089C	PRY1	P47032	299 aa		3.43	□□□□□ -1.86
RLM1	YPL089C	ITT1	Q04638	464 aa		3.43	□□□□□ -1.86
RLM1	YPL089C	GLC3	P32775	704 aa		3.43	□□□□□ -1.86
RLM1	YPL089C	ATF2	P53296	535 aa		3.43	□□□□□ -1.86
RLM1	YPL089C	AIM7	Q12156	149 aa		3.42	□□□□□ -1.86
RLM1	YPL089C	NAF1	P53919	492 aa	Known RBP	3.41	□□□□□ -1.86
RLM1	YPL089C	FPK1	P53739	893 aa		3.41	□□□□□ -1.86
RLM1	YPL089C	RPN1	P38764	993 aa	Known RBP	3.39	□□□□□ -1.87
RLM1	YPL089C	DLD3	P39976	496 aa	Known RBP	3.39	□□□□□ -1.87
RLM1	YPL089C	FPS1	P23900	669 aa		3.39	□□□□□ -1.87
RLM1	YPL089C	FBP26	P32604	452 aa		3.39	□□□□□ -1.87
RLM1	YPL089C	HST2	P53686	357 aa		3.38	□□□□□ -1.87
RLM1	YPL089C	RPP2B	P02400	110 aa	Known RBP	3.37	□□□□□ -1.87
RLM1	YPL089C	STE6	P12866	1290 aa		3.37	□□□□□ -1.87
RLM1	YPL089C	KIN1	P13185	1064 aa		3.36	□□□□□ -1.87
RLM1	YPL089C	SCJ1	P25303	377 aa		3.36	□□□□□ -1.87
RLM1	YPL089C	ELM1	P32801	640 aa		3.36	□□□□□ -1.87
RLM1	YPL089C	KNS1	P32350	737 aa	Predicted RBP	3.36	□□□□□ -1.87
RLM1	YPL089C	GLN1	P32288	370 aa	Known RBP	3.35	□□□□□ -1.87
RLM1	YPL089C	MMP1	Q12372	583 aa		3.35	□□□□□ -1.87
RLM1	YPL089C	PDC5	P16467	563 aa	Known RBP	3.34	□□□□□ -1.88
RLM1	YPL089C	KTR1	P27810	393 aa	Known RBP	3.34	□□□□□ -1.88
RLM1	YPL089C	CSN12	P47130	423 aa		3.34	□□□□□ -1.88
RLM1	YPL089C	LIP5	P32875	414 aa		3.33	□□□□□ -1.88
RLM1	YPL089C	ESS1	P22696	170 aa		3.32	□□□□□ -1.88
RLM1	YPL089C	AHP1	P38013	176 aa	Known RBP	3.32	□□□□□ -1.88
RLM1	YPL089C	TPS3	P38426	1054 aa	Known RBP	3.32	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 99.5 ms