RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 RGS20O76081 388 aa11.69□□□□□ -0.54
CASC19-248ENST00000641674 BCAMP50895 628 aa11.67□□□□□ -0.54
CASC19-248ENST00000641674 RABGEF1Q9UJ41 708 aa11.67□□□□□ -0.54
CASC19-248ENST00000641674 CADPS2Q86UW7 1296 aa11.67□□□□□ -0.54
CASC19-248ENST00000641674 DCAF8L2P0C7V8 631 aa11.66□□□□□ -0.54
CASC19-248ENST00000641674 ANKK1Q8NFD2 765 aa11.65□□□□□ -0.55
CASC19-248ENST00000641674 TYW1BQ6NUM6 668 aa11.63□□□□□ -0.55
CASC19-248ENST00000641674 NACADO15069 1562 aa11.62□□□□□ -0.55
CASC19-248ENST00000641674 KIAA1468Q9P260 1216 aa11.62□□□□□ -0.55
CASC19-248ENST00000641674 PHF14O94880 888 aa11.6□□□□□ -0.55
CASC19-248ENST00000641674 SOWAHBA6NEL2 793 aa11.59□□□□□ -0.55
CASC19-248ENST00000641674 ITGBL1O95965 494 aaPredicted RBP11.59□□□□□ -0.55
CASC19-248ENST00000641674 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
CASC19-248ENST00000641674 SEPT9Q9UHD8 586 aaPredicted RBP11.59□□□□□ -0.55
CASC19-248ENST00000641674 ZFRQ96KR1 1074 aaKnown RBP11.58□□□□□ -0.56
CASC19-248ENST00000641674 WBP1LQ9NX94 342 aa11.58□□□□□ -0.56
CASC19-248ENST00000641674 C6orf132Q5T0Z8 1188 aa11.56□□□□□ -0.56
CASC19-248ENST00000641674 LAPTM4BQ86VI4 370 aa11.56□□□□□ -0.56
CASC19-248ENST00000641674 DPYSL4O14531 572 aa11.54□□□□□ -0.56
CASC19-248ENST00000641674 RBM33Q96EV2 1170 aaKnown RBP11.54□□□□□ -0.56
CASC19-248ENST00000641674 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
CASC19-248ENST00000641674 CAMK2BQ13554 666 aa11.51□□□□□ -0.57
CASC19-248ENST00000641674 DDX12PQ92771 950 aa11.51□□□□□ -0.57
CASC19-248ENST00000641674 EPAS1Q99814 870 aa11.51□□□□□ -0.57
CASC19-248ENST00000641674 ONECUT3O60422 494 aaPredicted RBP11.49□□□□□ -0.57
CASC19-248ENST00000641674 KCNC4Q03721 635 aa11.49□□□□□ -0.57
CASC19-248ENST00000641674 FAM98CQ17RN3 349 aaKnown RBP11.47□□□□□ -0.57
CASC19-248ENST00000641674 Q6ZNB5 142 aa11.47□□□□□ -0.57
CASC19-248ENST00000641674 NYAP1Q6ZVC0 841 aa11.47□□□□□ -0.57
CASC19-248ENST00000641674 HPS5Q9UPZ3 1129 aa11.47□□□□□ -0.57
CASC19-248ENST00000641674 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.46□□□□□ -0.57
CASC19-248ENST00000641674 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
CASC19-248ENST00000641674 TSR3Q9UJK0 312 aaKnown RBP11.44□□□□□ -0.58
CASC19-248ENST00000641674 TSR1Q2NL82 804 aaKnown RBP11.43□□□□□ -0.58
CASC19-248ENST00000641674 LRCH3Q96II8 777 aa11.43□□□□□ -0.58
CASC19-248ENST00000641674 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
CASC19-248ENST00000641674 UNC13AQ9UPW8 1703 aa11.41□□□□□ -0.58
CASC19-248ENST00000641674 NBR1Q14596 966 aa11.41□□□□□ -0.58
CASC19-248ENST00000641674 SMAPO00193 183 aa11.39□□□□□ -0.59
CASC19-248ENST00000641674 MAP3K7O43318 606 aa11.39□□□□□ -0.59
CASC19-248ENST00000641674 EN1Q05925 392 aaPredicted RBP11.39□□□□□ -0.59
CASC19-248ENST00000641674 PACS2Q86VP3 889 aa11.37□□□□□ -0.59
CASC19-248ENST00000641674 C3orf80F5H4A9 247 aa11.36□□□□□ -0.59
CASC19-248ENST00000641674 LCE2BO14633 110 aa11.36□□□□□ -0.59
CASC19-248ENST00000641674 FAM198AQ9UFP1 575 aa11.36□□□□□ -0.59
CASC19-248ENST00000641674 PPP4CP60510 307 aa11.35□□□□□ -0.59
CASC19-248ENST00000641674 PRIM1P49642 420 aaKnown RBP11.34□□□□□ -0.59
CASC19-248ENST00000641674 SAMD7Q7Z3H4 446 aa11.34□□□□□ -0.59
CASC19-248ENST00000641674 PDIA6Q15084 440 aa11.33□□□□□ -0.6
CASC19-248ENST00000641674 TJAP1Q5JTD0 557 aa11.33□□□□□ -0.6
CASC19-248ENST00000641674 CDCA7LQ96GN5 454 aa11.32□□□□□ -0.6
CASC19-248ENST00000641674 GFRA3O60609 400 aa11.31□□□□□ -0.6
CASC19-248ENST00000641674 ZCCHC6Q5VYS8 1495 aaKnown RBP11.3□□□□□ -0.6
CASC19-248ENST00000641674 DCAF1Q9Y4B6 1507 aa11.3□□□□□ -0.6
CASC19-248ENST00000641674 PRSS12P56730 875 aa11.28□□□□□ -0.6
CASC19-248ENST00000641674 BICRAQ9NZM4 1560 aa11.28□□□□□ -0.6
CASC19-248ENST00000641674 MTRQ99707 1265 aa11.28□□□□□ -0.6
CASC19-248ENST00000641674 PRKD2Q9BZL6 878 aa11.28□□□□□ -0.6
CASC19-248ENST00000641674 GRXCR2A6NFK2 248 aa11.26□□□□□ -0.61
CASC19-248ENST00000641674 LAPTM4AQ15012 233 aa11.26□□□□□ -0.61
CASC19-248ENST00000641674 ZNF516Q92618 1163 aa11.26□□□□□ -0.61
CASC19-248ENST00000641674 TATDN2Q93075 761 aa11.26□□□□□ -0.61
CASC19-248ENST00000641674 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
CASC19-248ENST00000641674 SPDYE16A6NNV3 312 aaPredicted RBP11.25□□□□□ -0.61
CASC19-248ENST00000641674 PPP1R18Q6NYC8 613 aa11.25□□□□□ -0.61
CASC19-248ENST00000641674 TRAF7Q6Q0C0 670 aa11.25□□□□□ -0.61
CASC19-248ENST00000641674 CDHR5Q9HBB8 845 aa11.24□□□□□ -0.61
CASC19-248ENST00000641674 RNF40O75150 1001 aa11.23□□□□□ -0.61
CASC19-248ENST00000641674 IL21Q9HBE4 155 aa11.23□□□□□ -0.61
CASC19-248ENST00000641674 NBPF26B4DH59 902 aa11.21□□□□□ -0.61
CASC19-248ENST00000641674 APLP1P51693 650 aa11.21□□□□□ -0.61
CASC19-248ENST00000641674 NUDT18Q6ZVK8 323 aa11.21□□□□□ -0.61
CASC19-248ENST00000641674 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
CASC19-248ENST00000641674 NKX2-3Q8TAU0 364 aa11.2□□□□□ -0.62
CASC19-248ENST00000641674 E2F4Q16254 413 aa11.18□□□□□ -0.62
CASC19-248ENST00000641674 CERKQ8TCT0 537 aa11.18□□□□□ -0.62
CASC19-248ENST00000641674 SHROOM4Q9ULL8 1493 aa11.18□□□□□ -0.62
CASC19-248ENST00000641674 NRG2O14511 850 aaPredicted RBP11.17□□□□□ -0.62
CASC19-248ENST00000641674 OSBPP22059 807 aa11.17□□□□□ -0.62
CASC19-248ENST00000641674 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.17□□□□□ -0.62
CASC19-248ENST00000641674 SCRIBQ14160 1630 aa11.17□□□□□ -0.62
CASC19-248ENST00000641674 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.63
CASC19-248ENST00000641674 COPS2P61201 443 aa11.14□□□□□ -0.63
CASC19-248ENST00000641674 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
CASC19-248ENST00000641674 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
CASC19-248ENST00000641674 SPRYD3Q8NCJ5 442 aa11.12□□□□□ -0.63
CASC19-248ENST00000641674 ARIH1Q9Y4X5 557 aaPredicted RBP11.12□□□□□ -0.63
CASC19-248ENST00000641674 PADI6Q6TGC4 694 aa11.11□□□□□ -0.63
CASC19-248ENST00000641674 NPDC1Q9NQX5 325 aaPredicted RBP11.1□□□□□ -0.63
CASC19-248ENST00000641674 PDZRN3Q9UPQ7 1066 aa11.1□□□□□ -0.63
CASC19-248ENST00000641674 TTC13Q8NBP0 860 aa11.09□□□□□ -0.63
CASC19-248ENST00000641674 RBM27Q9P2N5 1060 aaKnown RBP11.09□□□□□ -0.63
CASC19-248ENST00000641674 WDR70Q9NW82 654 aa11.08□□□□□ -0.64
CASC19-248ENST00000641674 CC2D2AQ9P2K1 1620 aa11.07□□□□□ -0.64
CASC19-248ENST00000641674 ZNF787Q6DD87 383 aa11.04□□□□□ -0.64
CASC19-248ENST00000641674 SLF2Q8IX21 1173 aa11.04□□□□□ -0.64
CASC19-248ENST00000641674 CECR2Q9BXF3 1484 aa11.04□□□□□ -0.64
CASC19-248ENST00000641674 EIF4G1Q04637 1599 aaKnown RBP11.03□□□□□ -0.64
CASC19-248ENST00000641674 ZPR1O75312 459 aa11.03□□□□□ -0.64
CASC19-248ENST00000641674 CFAP44Q96MT7 982 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms