RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 ANKRD50Q9ULJ7 1429 aa18.32■□□□□ 0.52
PAX6-280ENST00000640872 PTPRGP23470 1445 aa18.32■□□□□ 0.52
PAX6-280ENST00000640872 CHD1O14646 1710 aa18.31■□□□□ 0.52
PAX6-280ENST00000640872 RALBP1Q15311 655 aa18.31■□□□□ 0.52
PAX6-280ENST00000640872 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
PAX6-280ENST00000640872 CARD11Q9BXL7 1154 aa18.31■□□□□ 0.52
PAX6-280ENST00000640872 KDM5DQ9BY66 1539 aa18.29■□□□□ 0.52
PAX6-280ENST00000640872 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
PAX6-280ENST00000640872 EXOC6Q8TAG9 804 aa18.29■□□□□ 0.52
PAX6-280ENST00000640872 ST20-MTHFSA0A0A6YYL1 179 aa18.27■□□□□ 0.52
PAX6-280ENST00000640872 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.52
PAX6-280ENST00000640872 SHANK2Q9UPX8 1470 aa18.27■□□□□ 0.51
PAX6-280ENST00000640872 ERCC6L2Q5T890 1561 aa18.26■□□□□ 0.51
PAX6-280ENST00000640872 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
PAX6-280ENST00000640872 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
PAX6-280ENST00000640872 NUP155O75694 1391 aa18.24■□□□□ 0.51
PAX6-280ENST00000640872 PARD3Q8TEW0 1356 aa18.24■□□□□ 0.51
PAX6-280ENST00000640872 PDE3BQ13370 1112 aa18.24■□□□□ 0.51
PAX6-280ENST00000640872 PDE4AP27815 886 aa18.23■□□□□ 0.51
PAX6-280ENST00000640872 MS4A1P11836 297 aa18.23■□□□□ 0.51
PAX6-280ENST00000640872 BACH2Q9BYV9 841 aa18.22■□□□□ 0.51
PAX6-280ENST00000640872 NLRP13Q86W25 1043 aa18.22■□□□□ 0.51
PAX6-280ENST00000640872 C9orf84Q5VXU9 1444 aa18.21■□□□□ 0.51
PAX6-280ENST00000640872 HNRNPMP52272 730 aaKnown RBP eCLIP18.21■□□□□ 0.51
PAX6-280ENST00000640872 NPM2Q86SE8 214 aaKnown RBP18.2■□□□□ 0.5
PAX6-280ENST00000640872 TRPM1Q7Z4N2 1603 aa18.19■□□□□ 0.5
PAX6-280ENST00000640872 KDM2AQ9Y2K7 1162 aa18.18■□□□□ 0.5
PAX6-280ENST00000640872 INSRP06213 1382 aa18.17■□□□□ 0.5
PAX6-280ENST00000640872 ZMYM4Q5VZL5 1548 aa18.17■□□□□ 0.5
PAX6-280ENST00000640872 DCAF11Q8TEB1 546 aa18.17■□□□□ 0.5
PAX6-280ENST00000640872 USP35Q9P2H5 1018 aa18.17■□□□□ 0.5
PAX6-280ENST00000640872 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
PAX6-280ENST00000640872 BLMP54132 1417 aaPredicted RBP18.16■□□□□ 0.5
PAX6-280ENST00000640872 PRAG1Q86YV5 1406 aa18.15■□□□□ 0.5
PAX6-280ENST00000640872 PER1O15534 1290 aaPredicted RBP18.15■□□□□ 0.5
PAX6-280ENST00000640872 SALL2Q9Y467 1007 aaPredicted RBP18.15■□□□□ 0.5
PAX6-280ENST00000640872 CDCA7LQ96GN5 454 aa18.14■□□□□ 0.49
PAX6-280ENST00000640872 LAS1LQ9Y4W2 734 aaKnown RBP18.13■□□□□ 0.49
PAX6-280ENST00000640872 NEFMP07197 916 aa18.12■□□□□ 0.49
PAX6-280ENST00000640872 COL17A1Q9UMD9 1497 aaPredicted RBP18.12■□□□□ 0.49
PAX6-280ENST00000640872 ARHGEF5Q12774 1597 aa18.12■□□□□ 0.49
PAX6-280ENST00000640872 LAMC1P11047 1609 aa18.11■□□□□ 0.49
PAX6-280ENST00000640872 GPRASP1Q5JY77 1395 aa18.11■□□□□ 0.49
PAX6-280ENST00000640872 TSPY4P0CV99 314 aa18.11■□□□□ 0.49
PAX6-280ENST00000640872 TSPY10P0CW01 314 aa18.11■□□□□ 0.49
PAX6-280ENST00000640872 CLASP1Q7Z460 1538 aa18.11■□□□□ 0.49
PAX6-280ENST00000640872 FAM135AQ9P2D6 1515 aa18.1■□□□□ 0.49
PAX6-280ENST00000640872 WASHC2CQ9Y4E1 1318 aa18.1■□□□□ 0.49
PAX6-280ENST00000640872 PPM1GO15355 546 aaPredicted RBP18.1■□□□□ 0.49
PAX6-280ENST00000640872 OSCARQ8IYS5 282 aa18.1■□□□□ 0.49
PAX6-280ENST00000640872 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
PAX6-280ENST00000640872 PRDM15P57071 1507 aaPredicted RBP18.08■□□□□ 0.49
PAX6-280ENST00000640872 CDC42BPBQ9Y5S2 1711 aa18.08■□□□□ 0.49
PAX6-280ENST00000640872 PLIN1O60240 522 aa18.08■□□□□ 0.48
PAX6-280ENST00000640872 IL27Q8NEV9 243 aa18.08■□□□□ 0.48
PAX6-280ENST00000640872 CRBNQ96SW2 442 aa18.08■□□□□ 0.48
PAX6-280ENST00000640872 SAMD9LQ8IVG5 1584 aa18.07■□□□□ 0.48
PAX6-280ENST00000640872 TTC37Q6PGP7 1564 aa18.07■□□□□ 0.48
PAX6-280ENST00000640872 ABCC2Q92887 1545 aa18.06■□□□□ 0.48
PAX6-280ENST00000640872 DDRGK1Q96HY6 314 aa18.05■□□□□ 0.48
PAX6-280ENST00000640872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.05■□□□□ 0.48
PAX6-280ENST00000640872 CCDC144AA2RUR9 1427 aa18.05■□□□□ 0.48
PAX6-280ENST00000640872 DISP3Q9P2K9 1392 aa18.05■□□□□ 0.48
PAX6-280ENST00000640872 NBPF1Q3BBV0 1214 aa18.04■□□□□ 0.48
PAX6-280ENST00000640872 A2MP01023 1474 aa18.04■□□□□ 0.48
PAX6-280ENST00000640872 TESK2Q96S53 571 aa18.04■□□□□ 0.48
PAX6-280ENST00000640872 SKAP1Q86WV1 359 aa18.03■□□□□ 0.48
PAX6-280ENST00000640872 PREX2Q70Z35 1606 aa18.03■□□□□ 0.48
PAX6-280ENST00000640872 PLA2R1Q13018 1463 aa18.02■□□□□ 0.48
PAX6-280ENST00000640872 KDM2BQ8NHM5 1336 aa18.02■□□□□ 0.48
PAX6-280ENST00000640872 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.48
PAX6-280ENST00000640872 CCDC141Q6ZP82 1450 aa18.02■□□□□ 0.48
PAX6-280ENST00000640872 ERBINQ96RT1 1412 aa18.01■□□□□ 0.47
PAX6-280ENST00000640872 SYCP2Q9BX26 1530 aa18.01■□□□□ 0.47
PAX6-280ENST00000640872 UNC13BO14795 1591 aa18.01■□□□□ 0.47
PAX6-280ENST00000640872 ARHGAP5Q13017 1502 aa18.01■□□□□ 0.47
PAX6-280ENST00000640872 EIF2AK4Q9P2K8 1649 aaKnown RBP18.01■□□□□ 0.47
PAX6-280ENST00000640872 MYO5CQ9NQX4 1742 aa18■□□□□ 0.47
PAX6-280ENST00000640872 PANK3Q9H999 370 aa17.99■□□□□ 0.47
PAX6-280ENST00000640872 C20orf194Q5TEA3 1177 aa17.98■□□□□ 0.47
PAX6-280ENST00000640872 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
PAX6-280ENST00000640872 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
PAX6-280ENST00000640872 ZCCHC11Q5TAX3 1644 aaKnown RBP17.96■□□□□ 0.47
PAX6-280ENST00000640872 RNF17Q9BXT8 1623 aaKnown RBP17.96■□□□□ 0.47
PAX6-280ENST00000640872 CENPQQ7L2Z9 268 aaPredicted RBP17.95■□□□□ 0.46
PAX6-280ENST00000640872 MAST1Q9Y2H9 1570 aa17.95■□□□□ 0.46
PAX6-280ENST00000640872 IQGAP3Q86VI3 1631 aa17.94■□□□□ 0.46
PAX6-280ENST00000640872 TMF1P82094 1093 aa17.94■□□□□ 0.46
PAX6-280ENST00000640872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.94■□□□□ 0.46
PAX6-280ENST00000640872 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
PAX6-280ENST00000640872 PLEKHH1Q9ULM0 1364 aa17.94■□□□□ 0.46
PAX6-280ENST00000640872 NFKBIBQ15653 356 aa17.93■□□□□ 0.46
PAX6-280ENST00000640872 RSPH4AQ5TD94 716 aa17.93■□□□□ 0.46
PAX6-280ENST00000640872 DUSP27Q5VZP5 1158 aa17.93■□□□□ 0.46
PAX6-280ENST00000640872 RTN4Q9NQC3 1192 aaKnown RBP17.93■□□□□ 0.46
PAX6-280ENST00000640872 ZNF521Q96K83 1311 aa17.92■□□□□ 0.46
PAX6-280ENST00000640872 GSE1Q14687 1217 aa17.92■□□□□ 0.46
PAX6-280ENST00000640872 ATP10AO60312 1499 aa17.91■□□□□ 0.46
PAX6-280ENST00000640872 WDR7Q9Y4E6 1490 aa17.91■□□□□ 0.46
PAX6-280ENST00000640872 C8orf34Q49A92 452 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms