RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 KDM5DQ9BY66 1539 aa16.08■□□□□ 0.16
GFAP-238ENST00000640859 KIF15Q9NS87 1388 aa16.07■□□□□ 0.16
GFAP-238ENST00000640859 POGZQ7Z3K3 1410 aa16.07■□□□□ 0.16
GFAP-238ENST00000640859 ABCC1P33527 1531 aa16.04■□□□□ 0.16
GFAP-238ENST00000640859 ARHGEF12Q9NZN5 1544 aa16.04■□□□□ 0.16
GFAP-238ENST00000640859 COL17A1Q9UMD9 1497 aaPredicted RBP16.04■□□□□ 0.16
GFAP-238ENST00000640859 SPAG9O60271 1321 aaKnown RBP16.04■□□□□ 0.16
GFAP-238ENST00000640859 AFAP1Q8N556 730 aa16.04■□□□□ 0.16
GFAP-238ENST00000640859 MAGI2Q86UL8 1455 aa16.03■□□□□ 0.16
GFAP-238ENST00000640859 L3MBTL2Q969R5 705 aa16.03■□□□□ 0.16
GFAP-238ENST00000640859 PLXNC1O60486 1568 aa16.02■□□□□ 0.16
GFAP-238ENST00000640859 PKD2Q13563 968 aa16.01■□□□□ 0.15
GFAP-238ENST00000640859 NUP155O75694 1391 aa16■□□□□ 0.15
GFAP-238ENST00000640859 ARID4BQ4LE39 1312 aaPredicted RBP15.99■□□□□ 0.15
GFAP-238ENST00000640859 TRAPPC8Q9Y2L5 1435 aa15.99■□□□□ 0.15
GFAP-238ENST00000640859 ZMYM4Q5VZL5 1548 aa15.98■□□□□ 0.15
GFAP-238ENST00000640859 ZFYVE16Q7Z3T8 1539 aa15.98■□□□□ 0.15
GFAP-238ENST00000640859 UNC13BO14795 1591 aa15.97■□□□□ 0.15
GFAP-238ENST00000640859 MLH3Q9UHC1 1453 aa15.97■□□□□ 0.15
GFAP-238ENST00000640859 CENPBP07199 599 aaPredicted RBP15.96■□□□□ 0.15
GFAP-238ENST00000640859 RICTORQ6R327 1708 aa15.96■□□□□ 0.15
GFAP-238ENST00000640859 DUOX2Q9NRD8 1548 aa15.95■□□□□ 0.14
GFAP-238ENST00000640859 KDM5CP41229 1560 aa15.95■□□□□ 0.14
GFAP-238ENST00000640859 HECW2Q9P2P5 1572 aa15.95■□□□□ 0.14
GFAP-238ENST00000640859 NBPF8Q3BBV2 869 aa15.94■□□□□ 0.14
GFAP-238ENST00000640859 HIRIP3Q9BW71 556 aaPredicted RBP15.94■□□□□ 0.14
GFAP-238ENST00000640859 FRMPD1Q5SYB0 1578 aa15.94■□□□□ 0.14
GFAP-238ENST00000640859 FAM135AQ9P2D6 1515 aa15.94■□□□□ 0.14
GFAP-238ENST00000640859 RTEL1-TNFRSF6BF6WH68 1400 aa15.94■□□□□ 0.14
GFAP-238ENST00000640859 ATP10AO60312 1499 aa15.93■□□□□ 0.14
GFAP-238ENST00000640859 DDX10Q13206 875 aaKnown RBP15.93■□□□□ 0.14
GFAP-238ENST00000640859 ARHGEF40Q8TER5 1519 aa15.92■□□□□ 0.14
GFAP-238ENST00000640859 ATP7AQ04656 1500 aa15.91■□□□□ 0.14
GFAP-238ENST00000640859 HSPA5P11021 654 aaKnown RBP15.91■□□□□ 0.14
GFAP-238ENST00000640859 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
GFAP-238ENST00000640859 ERBINQ96RT1 1412 aa15.91■□□□□ 0.14
GFAP-238ENST00000640859 IQGAP3Q86VI3 1631 aa15.9■□□□□ 0.14
GFAP-238ENST00000640859 YEATS2Q9ULM3 1422 aa15.9■□□□□ 0.14
GFAP-238ENST00000640859 EIF4G2P78344 907 aaKnown RBP eCLIP15.88■□□□□ 0.13
GFAP-238ENST00000640859 UHRF1BP1Q6BDS2 1440 aa15.85■□□□□ 0.13
GFAP-238ENST00000640859 A2MP01023 1474 aa15.85■□□□□ 0.13
GFAP-238ENST00000640859 INO80Q9ULG1 1556 aaPredicted RBP15.85■□□□□ 0.13
GFAP-238ENST00000640859 YTHDC1Q96MU7 727 aaKnown RBP15.85■□□□□ 0.13
GFAP-238ENST00000640859 MLECQ14165 292 aa15.84■□□□□ 0.13
GFAP-238ENST00000640859 SPATA31E1Q6ZUB1 1445 aa15.84■□□□□ 0.13
GFAP-238ENST00000640859 PLA2R1Q13018 1463 aa15.84■□□□□ 0.13
GFAP-238ENST00000640859 DIP2CQ9Y2E4 1556 aa15.83■□□□□ 0.13
GFAP-238ENST00000640859 DHX29Q7Z478 1369 aaKnown RBP15.83■□□□□ 0.12
GFAP-238ENST00000640859 KIDINS220Q9ULH0 1771 aa15.82■□□□□ 0.12
GFAP-238ENST00000640859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
GFAP-238ENST00000640859 ABCA6Q8N139 1617 aa15.81■□□□□ 0.12
GFAP-238ENST00000640859 REREQ9P2R6 1566 aa15.81■□□□□ 0.12
GFAP-238ENST00000640859 WASHC2AQ641Q2 1341 aa15.8■□□□□ 0.12
GFAP-238ENST00000640859 KIF3BO15066 747 aa15.8■□□□□ 0.12
GFAP-238ENST00000640859 DEPDC5O75140 1603 aa15.79■□□□□ 0.12
GFAP-238ENST00000640859 GGT6Q6P531 493 aa15.79■□□□□ 0.12
GFAP-238ENST00000640859 AGLP35573 1532 aa15.78■□□□□ 0.12
GFAP-238ENST00000640859 RALGAPBQ86X10 1494 aa15.78■□□□□ 0.12
GFAP-238ENST00000640859 POLR1AO95602 1720 aaPredicted RBP15.77■□□□□ 0.12
GFAP-238ENST00000640859 CCDC144AA2RUR9 1427 aa15.77■□□□□ 0.11
GFAP-238ENST00000640859 CCDC7Q96M83 1385 aa15.76■□□□□ 0.11
GFAP-238ENST00000640859 EIF2AK4Q9P2K8 1649 aaKnown RBP15.76■□□□□ 0.11
GFAP-238ENST00000640859 C11orf95C9JLR9 678 aaPredicted RBP15.76■□□□□ 0.11
GFAP-238ENST00000640859 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
GFAP-238ENST00000640859 ANP32CO43423 234 aa15.76■□□□□ 0.11
GFAP-238ENST00000640859 KANK1Q14678 1352 aa15.75■□□□□ 0.11
GFAP-238ENST00000640859 VWDEQ8N2E2 1590 aa15.75■□□□□ 0.11
GFAP-238ENST00000640859 E9PCH4 1651 aa15.74■□□□□ 0.11
GFAP-238ENST00000640859 WASHC2CQ9Y4E1 1318 aa15.73■□□□□ 0.11
GFAP-238ENST00000640859 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
GFAP-238ENST00000640859 DCAF11Q8TEB1 546 aa15.72■□□□□ 0.11
GFAP-238ENST00000640859 TET3O43151 1660 aa15.72■□□□□ 0.11
GFAP-238ENST00000640859 USP47Q96K76 1375 aa15.72■□□□□ 0.11
GFAP-238ENST00000640859 ZNF326Q5BKZ1 582 aaKnown RBP15.71■□□□□ 0.11
GFAP-238ENST00000640859 MROH1Q8NDA8 1641 aa15.71■□□□□ 0.11
GFAP-238ENST00000640859 PTPRTO14522 1441 aa15.7■□□□□ 0.1
GFAP-238ENST00000640859 KDM4FA0A1W2PPD8 638 aa15.7■□□□□ 0.1
GFAP-238ENST00000640859 KDM2AQ9Y2K7 1162 aa15.7■□□□□ 0.1
GFAP-238ENST00000640859 BCORL1Q5H9F3 1711 aa15.7■□□□□ 0.1
GFAP-238ENST00000640859 PRAG1Q86YV5 1406 aa15.69■□□□□ 0.1
GFAP-238ENST00000640859 PRDM15P57071 1507 aaPredicted RBP15.69■□□□□ 0.1
GFAP-238ENST00000640859 KIF7Q2M1P5 1343 aa15.68■□□□□ 0.1
GFAP-238ENST00000640859 TRPM1Q7Z4N2 1603 aa15.68■□□□□ 0.1
GFAP-238ENST00000640859 SPHKAPQ2M3C7 1700 aa15.68■□□□□ 0.1
GFAP-238ENST00000640859 TRPM2O94759 1503 aa15.68■□□□□ 0.1
GFAP-238ENST00000640859 GTF3C3Q9Y5Q9 886 aa15.67■□□□□ 0.1
GFAP-238ENST00000640859 RNF17Q9BXT8 1623 aaKnown RBP15.66■□□□□ 0.1
GFAP-238ENST00000640859 CARD11Q9BXL7 1154 aa15.66■□□□□ 0.1
GFAP-238ENST00000640859 RGL3Q3MIN7 710 aa15.65■□□□□ 0.1
GFAP-238ENST00000640859 CEP152O94986 1710 aa15.65■□□□□ 0.1
GFAP-238ENST00000640859 LAMC1P11047 1609 aa15.65■□□□□ 0.1
GFAP-238ENST00000640859 GPRASP1Q5JY77 1395 aa15.64■□□□□ 0.09
GFAP-238ENST00000640859 ADAMTSL3P82987 1691 aa15.64■□□□□ 0.09
GFAP-238ENST00000640859 CLTCL1P53675 1640 aa15.64■□□□□ 0.09
GFAP-238ENST00000640859 MADDQ8WXG6 1647 aa15.64■□□□□ 0.09
GFAP-238ENST00000640859 LMTK2Q8IWU2 1503 aa15.63■□□□□ 0.09
GFAP-238ENST00000640859 PTPRMP28827 1452 aa15.63■□□□□ 0.09
GFAP-238ENST00000640859 FER1L4A9Z1Z3 1794 aa15.62■□□□□ 0.09
GFAP-238ENST00000640859 ROCK2O75116 1388 aaKnown RBP15.62■□□□□ 0.09
GFAP-238ENST00000640859 ZMYM3Q14202 1370 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms