RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 NCOA1Q15788 1441 aa21.14■□□□□ 0.97
PAX6-277ENST00000640735 SENP3Q9H4L4 574 aaPredicted RBP21.14■□□□□ 0.97
PAX6-277ENST00000640735 ZNF777Q9ULD5 760 aaPredicted RBP21.14■□□□□ 0.97
PAX6-277ENST00000640735 CROCC2H7BZ55 1655 aa21.14■□□□□ 0.97
PAX6-277ENST00000640735 SAMD9LQ8IVG5 1584 aa21.13■□□□□ 0.97
PAX6-277ENST00000640735 EIF4G2P78344 907 aaKnown RBP eCLIP21.13■□□□□ 0.97
PAX6-277ENST00000640735 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
PAX6-277ENST00000640735 PZPP20742 1482 aa21.12■□□□□ 0.97
PAX6-277ENST00000640735 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
PAX6-277ENST00000640735 ADGRL1O94910 1474 aa21.09■□□□□ 0.97
PAX6-277ENST00000640735 ABCC1P33527 1531 aa21.08■□□□□ 0.97
PAX6-277ENST00000640735 FOXD1Q16676 465 aa21.08■□□□□ 0.96
PAX6-277ENST00000640735 PLEKHH2Q8IVE3 1493 aa21.05■□□□□ 0.96
PAX6-277ENST00000640735 SYCP2Q9BX26 1530 aa21.05■□□□□ 0.96
PAX6-277ENST00000640735 EIF5BO60841 1220 aaKnown RBP21.05■□□□□ 0.96
PAX6-277ENST00000640735 FOXD4L1Q9NU39 408 aa21.05■□□□□ 0.96
PAX6-277ENST00000640735 SHANK2Q9UPX8 1470 aa21.05■□□□□ 0.96
PAX6-277ENST00000640735 SCAPERQ9BY12 1400 aa21.05■□□□□ 0.96
PAX6-277ENST00000640735 SPATA31E1Q6ZUB1 1445 aa21.04■□□□□ 0.96
PAX6-277ENST00000640735 CNTLNQ9NXG0 1405 aa21.04■□□□□ 0.96
PAX6-277ENST00000640735 ARHGEF12Q9NZN5 1544 aa21.04■□□□□ 0.96
PAX6-277ENST00000640735 NBPF8Q3BBV2 869 aa21.03■□□□□ 0.96
PAX6-277ENST00000640735 ANKRD30AQ9BXX3 1397 aa21.03■□□□□ 0.96
PAX6-277ENST00000640735 FBXO3Q9UK99 471 aa21.03■□□□□ 0.96
PAX6-277ENST00000640735 KIAA1107Q9UPP5 1409 aa21.02■□□□□ 0.96
PAX6-277ENST00000640735 CCDC7Q96M83 1385 aa21.02■□□□□ 0.96
PAX6-277ENST00000640735 MBD5Q9P267 1494 aa21.02■□□□□ 0.96
PAX6-277ENST00000640735 POLR1AO95602 1720 aaPredicted RBP21.01■□□□□ 0.95
PAX6-277ENST00000640735 HNRNPMP52272 730 aaKnown RBP eCLIP21.01■□□□□ 0.95
PAX6-277ENST00000640735 COL17A1Q9UMD9 1497 aaPredicted RBP21.01■□□□□ 0.95
PAX6-277ENST00000640735 POGZQ7Z3K3 1410 aa20.99■□□□□ 0.95
PAX6-277ENST00000640735 RICTORQ6R327 1708 aa20.98■□□□□ 0.95
PAX6-277ENST00000640735 TRAPPC8Q9Y2L5 1435 aa20.98■□□□□ 0.95
PAX6-277ENST00000640735 ARHGEF5Q12774 1597 aa20.98■□□□□ 0.95
PAX6-277ENST00000640735 FRMPD1Q5SYB0 1578 aa20.98■□□□□ 0.95
PAX6-277ENST00000640735 RAPGEF3O95398 923 aa20.97■□□□□ 0.95
PAX6-277ENST00000640735 KDM5DQ9BY66 1539 aa20.97■□□□□ 0.95
PAX6-277ENST00000640735 ANKRD50Q9ULJ7 1429 aa20.96■□□□□ 0.95
PAX6-277ENST00000640735 C11orf95C9JLR9 678 aaPredicted RBP20.96■□□□□ 0.95
PAX6-277ENST00000640735 ZNF518AQ6AHZ1 1483 aa20.96■□□□□ 0.95
PAX6-277ENST00000640735 CCDC141Q6ZP82 1450 aa20.95■□□□□ 0.94
PAX6-277ENST00000640735 AFAP1Q8N556 730 aa20.94■□□□□ 0.94
PAX6-277ENST00000640735 C9orf84Q5VXU9 1444 aa20.93■□□□□ 0.94
PAX6-277ENST00000640735 KDM5CP41229 1560 aa20.93■□□□□ 0.94
PAX6-277ENST00000640735 RSPH4AQ5TD94 716 aa20.91■□□□□ 0.94
PAX6-277ENST00000640735 ZMYM4Q5VZL5 1548 aa20.9■□□□□ 0.94
PAX6-277ENST00000640735 UHRF1BP1Q6BDS2 1440 aa20.9■□□□□ 0.94
PAX6-277ENST00000640735 PKD2Q13563 968 aa20.89■□□□□ 0.93
PAX6-277ENST00000640735 TSHZ2Q9NRE2 1034 aa20.89■□□□□ 0.93
PAX6-277ENST00000640735 HECW2Q9P2P5 1572 aa20.88■□□□□ 0.93
PAX6-277ENST00000640735 NEFLP07196 543 aa20.88■□□□□ 0.93
PAX6-277ENST00000640735 PRKRIP1Q9H875 184 aaPredicted RBP20.88■□□□□ 0.93
PAX6-277ENST00000640735 KIF7Q2M1P5 1343 aa20.88■□□□□ 0.93
PAX6-277ENST00000640735 SPAG9O60271 1321 aaKnown RBP20.87■□□□□ 0.93
PAX6-277ENST00000640735 INO80Q9ULG1 1556 aaPredicted RBP20.86■□□□□ 0.93
PAX6-277ENST00000640735 TSPY4P0CV99 314 aa20.86■□□□□ 0.93
PAX6-277ENST00000640735 TSPY10P0CW01 314 aa20.86■□□□□ 0.93
PAX6-277ENST00000640735 ZFYVE16Q7Z3T8 1539 aa20.85■□□□□ 0.93
PAX6-277ENST00000640735 MAST1Q9Y2H9 1570 aa20.85■□□□□ 0.93
PAX6-277ENST00000640735 MYT1LQ9UL68 1186 aa20.85■□□□□ 0.93
PAX6-277ENST00000640735 MLH3Q9UHC1 1453 aa20.85■□□□□ 0.93
PAX6-277ENST00000640735 ATP7AQ04656 1500 aa20.85■□□□□ 0.93
PAX6-277ENST00000640735 KIDINS220Q9ULH0 1771 aa20.84■□□□□ 0.93
PAX6-277ENST00000640735 NUP155O75694 1391 aa20.83■□□□□ 0.93
PAX6-277ENST00000640735 ARID4BQ4LE39 1312 aaPredicted RBP20.83■□□□□ 0.93
PAX6-277ENST00000640735 MAGI2Q86UL8 1455 aa20.83■□□□□ 0.92
PAX6-277ENST00000640735 HNRNPUQ00839 825 aaKnown RBP eCLIP20.82■□□□□ 0.92
PAX6-277ENST00000640735 RALGAPBQ86X10 1494 aa20.82■□□□□ 0.92
PAX6-277ENST00000640735 RTEL1-TNFRSF6BF6WH68 1400 aa20.81■□□□□ 0.92
PAX6-277ENST00000640735 KIF15Q9NS87 1388 aa20.81■□□□□ 0.92
PAX6-277ENST00000640735 YEATS2Q9ULM3 1422 aa20.8■□□□□ 0.92
PAX6-277ENST00000640735 ARHGEF40Q8TER5 1519 aa20.8■□□□□ 0.92
PAX6-277ENST00000640735 ABCA6Q8N139 1617 aa20.8■□□□□ 0.92
PAX6-277ENST00000640735 BCORL1Q5H9F3 1711 aa20.79■□□□□ 0.92
PAX6-277ENST00000640735 USP47Q96K76 1375 aa20.79■□□□□ 0.92
PAX6-277ENST00000640735 CCDC184Q52MB2 194 aa20.79■□□□□ 0.92
PAX6-277ENST00000640735 DIP2CQ9Y2E4 1556 aa20.78■□□□□ 0.92
PAX6-277ENST00000640735 PLXNC1O60486 1568 aa20.78■□□□□ 0.92
PAX6-277ENST00000640735 DHX29Q7Z478 1369 aaKnown RBP20.76■□□□□ 0.91
PAX6-277ENST00000640735 ATP10AO60312 1499 aa20.73■□□□□ 0.91
PAX6-277ENST00000640735 FAM135AQ9P2D6 1515 aa20.71■□□□□ 0.91
PAX6-277ENST00000640735 ERICH6BQ5W0A0 696 aa20.71■□□□□ 0.91
PAX6-277ENST00000640735 UNC13BO14795 1591 aa20.71■□□□□ 0.91
PAX6-277ENST00000640735 ROCK2O75116 1388 aaKnown RBP20.71■□□□□ 0.91
PAX6-277ENST00000640735 MRS2Q9HD23 443 aa20.71■□□□□ 0.91
PAX6-277ENST00000640735 ZBED9Q6R2W3 1325 aa20.71■□□□□ 0.91
PAX6-277ENST00000640735 A2MP01023 1474 aa20.7■□□□□ 0.9
PAX6-277ENST00000640735 DUOX2Q9NRD8 1548 aa20.69■□□□□ 0.9
PAX6-277ENST00000640735 REREQ9P2R6 1566 aa20.68■□□□□ 0.9
PAX6-277ENST00000640735 SIGLEC1Q9BZZ2 1709 aa20.66■□□□□ 0.9
PAX6-277ENST00000640735 ZNF326Q5BKZ1 582 aaKnown RBP20.63■□□□□ 0.89
PAX6-277ENST00000640735 ERBINQ96RT1 1412 aa20.63■□□□□ 0.89
PAX6-277ENST00000640735 FAM9BQ8IZU0 186 aa20.63■□□□□ 0.89
PAX6-277ENST00000640735 CARD11Q9BXL7 1154 aa20.63■□□□□ 0.89
PAX6-277ENST00000640735 IQGAP3Q86VI3 1631 aa20.62■□□□□ 0.89
PAX6-277ENST00000640735 EIF2AK4Q9P2K8 1649 aaKnown RBP20.62■□□□□ 0.89
PAX6-277ENST00000640735 AGLP35573 1532 aa20.61■□□□□ 0.89
PAX6-277ENST00000640735 PLA2R1Q13018 1463 aa20.61■□□□□ 0.89
PAX6-277ENST00000640735 TRPM1Q7Z4N2 1603 aa20.6■□□□□ 0.89
PAX6-277ENST00000640735 PRAG1Q86YV5 1406 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms