RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	PCDH10	Q9P2E7	1040 aa		13.28	□□□□□ -0.28
PAX6-267	ENST00000640251	KRTAP3-3	Q9BYR6	98 aa		13.27	□□□□□ -0.29
PAX6-267	ENST00000640251	KRTAP3-2	Q9BYR7	98 aa		13.27	□□□□□ -0.29
PAX6-267	ENST00000640251	PSEN2	P49810	448 aa		13.26	□□□□□ -0.29
PAX6-267	ENST00000640251	FBXW7	Q969H0	707 aa		13.26	□□□□□ -0.29
PAX6-267	ENST00000640251	KCNK17	Q96T54	332 aa		13.26	□□□□□ -0.29
PAX6-267	ENST00000640251	ARHGAP33	O14559	1287 aa		13.25	□□□□□ -0.29
PAX6-267	ENST00000640251	BCL2L12	Q9HB09	334 aa		13.25	□□□□□ -0.29
PAX6-267	ENST00000640251	PBX2	P40425	430 aa		13.24	□□□□□ -0.29
PAX6-267	ENST00000640251	OSBP	P22059	807 aa		13.22	□□□□□ -0.29
PAX6-267	ENST00000640251	PTPRE	P23469	700 aa		13.22	□□□□□ -0.29
PAX6-267	ENST00000640251	PRIM1	P49642	420 aa	Known RBP	13.22	□□□□□ -0.29
PAX6-267	ENST00000640251	KCNH8	Q96L42	1107 aa		13.22	□□□□□ -0.29
PAX6-267	ENST00000640251	MAP3K7	O43318	606 aa		13.21	□□□□□ -0.29
PAX6-267	ENST00000640251	ANKRD13D	Q6ZTN6	518 aa		13.21	□□□□□ -0.29
PAX6-267	ENST00000640251	EN1	Q05925	392 aa	Predicted RBP	13.2	□□□□□ -0.3
PAX6-267	ENST00000640251	C6orf132	Q5T0Z8	1188 aa		13.2	□□□□□ -0.3
PAX6-267	ENST00000640251	DMRTA1	Q5VZB9	504 aa		13.2	□□□□□ -0.3
PAX6-267	ENST00000640251	TESPA1	A2RU30	521 aa	Predicted RBP	13.19	□□□□□ -0.3
PAX6-267	ENST00000640251	LSM11	P83369	360 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
PAX6-267	ENST00000640251	TSR1	Q2NL82	804 aa	Known RBP	13.18	□□□□□ -0.3
PAX6-267	ENST00000640251	CC2D2A	Q9P2K1	1620 aa		13.17	□□□□□ -0.3
PAX6-267	ENST00000640251	COL9A1	P20849	921 aa		13.15	□□□□□ -0.3
PAX6-267	ENST00000640251	SMYD5	Q6GMV2	418 aa		13.13	□□□□□ -0.31
PAX6-267	ENST00000640251	EIF4G1	Q04637	1599 aa	Known RBP	13.12	□□□□□ -0.31
PAX6-267	ENST00000640251	CDHR5	Q9HBB8	845 aa		13.12	□□□□□ -0.31
PAX6-267	ENST00000640251	PPP1R3G	B7ZBB8	358 aa		13.11	□□□□□ -0.31
PAX6-267	ENST00000640251	RBM26	Q5T8P6	1007 aa	Known RBP	13.11	□□□□□ -0.31
PAX6-267	ENST00000640251	CECR2	Q9BXF3	1484 aa		13.1	□□□□□ -0.31
PAX6-267	ENST00000640251	ADGRD1	Q6QNK2	874 aa		13.09	□□□□□ -0.31
PAX6-267	ENST00000640251	NUTM2F	A1L443	756 aa		13.08	□□□□□ -0.32
PAX6-267	ENST00000640251	ZBED2	Q9BTP6	218 aa		13.08	□□□□□ -0.32
PAX6-267	ENST00000640251	PROX2	Q3B8N5	592 aa		13.07	□□□□□ -0.32
PAX6-267	ENST00000640251	VPS9D1	Q9Y2B5	631 aa		13.07	□□□□□ -0.32
PAX6-267	ENST00000640251	TK2	O00142	265 aa		13.05	□□□□□ -0.32
PAX6-267	ENST00000640251	SPNS2	Q8IVW8	549 aa		13.05	□□□□□ -0.32
PAX6-267	ENST00000640251	SHROOM4	Q9ULL8	1493 aa		13.04	□□□□□ -0.32
PAX6-267	ENST00000640251	TULP1	O00294	542 aa	Predicted RBP	13.04	□□□□□ -0.32
PAX6-267	ENST00000640251	SLC4A5	Q9BY07	1137 aa		13.02	□□□□□ -0.33
PAX6-267	ENST00000640251	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.02	□□□□□ -0.33
PAX6-267	ENST00000640251	CERK	Q8TCT0	537 aa		13	□□□□□ -0.33
PAX6-267	ENST00000640251	CDCA7L	Q96GN5	454 aa		13	□□□□□ -0.33
PAX6-267	ENST00000640251	STAC3	Q96MF2	364 aa		13	□□□□□ -0.33
PAX6-267	ENST00000640251	PRSS12	P56730	875 aa		12.99	□□□□□ -0.33
PAX6-267	ENST00000640251	PLSCR2	Q9NRY7	297 aa		12.99	□□□□□ -0.33
PAX6-267	ENST00000640251	TRIM6-TRIM34	B2RNG4	842 aa		12.98	□□□□□ -0.33
PAX6-267	ENST00000640251	HR	O43593	1189 aa		12.98	□□□□□ -0.33
PAX6-267	ENST00000640251	PTGDR	Q13258	359 aa		12.98	□□□□□ -0.33
PAX6-267	ENST00000640251	KIAA1468	Q9P260	1216 aa		12.98	□□□□□ -0.33
PAX6-267	ENST00000640251	TSKS	Q9UJT2	592 aa		12.97	□□□□□ -0.33
PAX6-267	ENST00000640251	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
PAX6-267	ENST00000640251	RABGEF1	Q9UJ41	708 aa		12.96	□□□□□ -0.33
PAX6-267	ENST00000640251	FCHSD2	O94868	740 aa		12.95	□□□□□ -0.34
PAX6-267	ENST00000640251	GPIHBP1	Q8IV16	184 aa		12.95	□□□□□ -0.34
PAX6-267	ENST00000640251	FAM198A	Q9UFP1	575 aa		12.95	□□□□□ -0.34
PAX6-267	ENST00000640251	PADI6	Q6TGC4	694 aa		12.94	□□□□□ -0.34
PAX6-267	ENST00000640251	BCAN	Q96GW7	911 aa		12.94	□□□□□ -0.34
PAX6-267	ENST00000640251	MYT1L	Q9UL68	1186 aa		12.94	□□□□□ -0.34
PAX6-267	ENST00000640251	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.93	□□□□□ -0.34
PAX6-267	ENST00000640251	MMRN1	Q13201	1228 aa		12.93	□□□□□ -0.34
PAX6-267	ENST00000640251	LMOD2	Q6P5Q4	547 aa		12.93	□□□□□ -0.34
PAX6-267	ENST00000640251	PACS2	Q86VP3	889 aa		12.93	□□□□□ -0.34
PAX6-267	ENST00000640251	ONECUT3	O60422	494 aa	Predicted RBP	12.92	□□□□□ -0.34
PAX6-267	ENST00000640251	MRPL50	Q8N5N7	158 aa	Known RBP	12.92	□□□□□ -0.34
PAX6-267	ENST00000640251	NBPF3	Q9H094	633 aa		12.92	□□□□□ -0.34
PAX6-267	ENST00000640251	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.91	□□□□□ -0.34
PAX6-267	ENST00000640251	SMAP	O00193	183 aa		12.89	□□□□□ -0.35
PAX6-267	ENST00000640251	GOLGA8CP	A6NN73	597 aa		12.88	□□□□□ -0.35
PAX6-267	ENST00000640251	C3orf80	F5H4A9	247 aa		12.88	□□□□□ -0.35
PAX6-267	ENST00000640251	GPR37	O15354	613 aa		12.88	□□□□□ -0.35
PAX6-267	ENST00000640251	RBM27	Q9P2N5	1060 aa	Known RBP	12.88	□□□□□ -0.35
PAX6-267	ENST00000640251	PNMA3	Q9UL41	463 aa		12.88	□□□□□ -0.35
PAX6-267	ENST00000640251	HIC1	Q14526	733 aa		12.87	□□□□□ -0.35
PAX6-267	ENST00000640251	TTC13	Q8NBP0	860 aa		12.87	□□□□□ -0.35
PAX6-267	ENST00000640251	FECH	P22830	423 aa		12.86	□□□□□ -0.35
PAX6-267	ENST00000640251	NUDT18	Q6ZVK8	323 aa		12.86	□□□□□ -0.35
PAX6-267	ENST00000640251	TATDN2	Q93075	761 aa		12.86	□□□□□ -0.35
PAX6-267	ENST00000640251	RNF166	Q96A37	237 aa	Predicted RBP	12.86	□□□□□ -0.35
PAX6-267	ENST00000640251	NBPF26	B4DH59	902 aa		12.85	□□□□□ -0.35
PAX6-267	ENST00000640251	GNPAT	O15228	680 aa		12.85	□□□□□ -0.35
PAX6-267	ENST00000640251	FAM161A	Q3B820	660 aa		12.84	□□□□□ -0.35
PAX6-267	ENST00000640251	KCTD12	Q96CX2	325 aa	Known RBP	12.84	□□□□□ -0.35
PAX6-267	ENST00000640251	FAM98C	Q17RN3	349 aa	Known RBP	12.81	□□□□□ -0.36
PAX6-267	ENST00000640251	LAPTM4B	Q86VI4	370 aa		12.81	□□□□□ -0.36
PAX6-267	ENST00000640251	WNT2B	Q93097	391 aa		12.81	□□□□□ -0.36
PAX6-267	ENST00000640251	ZFR	Q96KR1	1074 aa	Known RBP	12.8	□□□□□ -0.36
PAX6-267	ENST00000640251	ADGRG1	Q9Y653	693 aa		12.79	□□□□□ -0.36
PAX6-267	ENST00000640251	ZC3H15	Q8WU90	426 aa	Known RBP	12.77	□□□□□ -0.37
PAX6-267	ENST00000640251	ANKK1	Q8NFD2	765 aa		12.76	□□□□□ -0.37
PAX6-267	ENST00000640251	RBM46	Q8TBY0	533 aa	Known RBP	12.76	□□□□□ -0.37
PAX6-267	ENST00000640251	EYA1	Q99502	592 aa		12.76	□□□□□ -0.37
PAX6-267	ENST00000640251	BCAM	P50895	628 aa		12.73	□□□□□ -0.37
PAX6-267	ENST00000640251	PTPN5	P54829	565 aa		12.73	□□□□□ -0.37
PAX6-267	ENST00000640251	OAT	P04181	439 aa		12.72	□□□□□ -0.37
PAX6-267	ENST00000640251	THSD4	Q6ZMP0	1018 aa		12.72	□□□□□ -0.37
PAX6-267	ENST00000640251	SAMD7	Q7Z3H4	446 aa		12.72	□□□□□ -0.37
PAX6-267	ENST00000640251	KRI1	Q8N9T8	703 aa	Known RBP	12.71	□□□□□ -0.37
PAX6-267	ENST00000640251	HDGF	P51858	240 aa	Known RBP	12.7	□□□□□ -0.38
PAX6-267	ENST00000640251	MAP2K5	Q13163	448 aa		12.7	□□□□□ -0.38
PAX6-267	ENST00000640251	LRCH3	Q96II8	777 aa		12.7	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms