RNA–Protein interactions for RNA: ENST00000640038.1

PAX6-263, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-263ENST00000640038 GGT6Q6P531 493 aa13.98□□□□□ -0.17
PAX6-263ENST00000640038 ERICH6BQ5W0A0 696 aa13.97□□□□□ -0.17
PAX6-263ENST00000640038 CDC42BPBQ9Y5S2 1711 aa13.96□□□□□ -0.17
PAX6-263ENST00000640038 DNMT1P26358 1616 aaKnown RBP13.96□□□□□ -0.17
PAX6-263ENST00000640038 FANCIQ9NVI1 1328 aa13.95□□□□□ -0.18
PAX6-263ENST00000640038 A2ML1A8K2U0 1454 aa13.94□□□□□ -0.18
PAX6-263ENST00000640038 ANKLE2Q86XL3 938 aa13.94□□□□□ -0.18
PAX6-263ENST00000640038 ITSN2Q9NZM3 1697 aa13.94□□□□□ -0.18
PAX6-263ENST00000640038 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
PAX6-263ENST00000640038 NEURL4Q96JN8 1562 aa13.92□□□□□ -0.18
PAX6-263ENST00000640038 ZNF777Q9ULD5 760 aaPredicted RBP13.92□□□□□ -0.18
PAX6-263ENST00000640038 CLIP1P30622 1438 aa13.91□□□□□ -0.18
PAX6-263ENST00000640038 TROQ12816 1431 aaPredicted RBP13.9□□□□□ -0.18
PAX6-263ENST00000640038 ABCC1P33527 1531 aa13.9□□□□□ -0.18
PAX6-263ENST00000640038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
PAX6-263ENST00000640038 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.19
PAX6-263ENST00000640038 RBM19Q9Y4C8 960 aaKnown RBP13.89□□□□□ -0.19
PAX6-263ENST00000640038 UPF1Q92900 1129 aaKnown RBP eCLIP13.88□□□□□ -0.19
PAX6-263ENST00000640038 STRCP1A6NGW2 1772 aa13.88□□□□□ -0.19
PAX6-263ENST00000640038 RNF17Q9BXT8 1623 aaKnown RBP13.87□□□□□ -0.19
PAX6-263ENST00000640038 LRRC7Q96NW7 1537 aa13.87□□□□□ -0.19
PAX6-263ENST00000640038 FBXO31Q5XUX0 539 aaPredicted RBP13.87□□□□□ -0.19
PAX6-263ENST00000640038 NPHP4O75161 1426 aaPredicted RBP13.87□□□□□ -0.19
PAX6-263ENST00000640038 HNRNPMP52272 730 aaKnown RBP eCLIP13.86□□□□□ -0.19
PAX6-263ENST00000640038 THEMISQ8N1K5 641 aaPredicted RBP13.86□□□□□ -0.19
PAX6-263ENST00000640038 PREX2Q70Z35 1606 aa13.86□□□□□ -0.19
PAX6-263ENST00000640038 SAMD9LQ8IVG5 1584 aa13.85□□□□□ -0.19
PAX6-263ENST00000640038 TNRQ92752 1358 aa13.84□□□□□ -0.19
PAX6-263ENST00000640038 TRIM52Q96A61 297 aa13.84□□□□□ -0.19
PAX6-263ENST00000640038 EHMT2Q96KQ7 1210 aa13.84□□□□□ -0.19
PAX6-263ENST00000640038 A2MP01023 1474 aa13.84□□□□□ -0.19
PAX6-263ENST00000640038 CEP162Q5TB80 1403 aa13.83□□□□□ -0.2
PAX6-263ENST00000640038 IQGAP1P46940 1657 aa13.82□□□□□ -0.2
PAX6-263ENST00000640038 EEA1Q15075 1411 aa13.81□□□□□ -0.2
PAX6-263ENST00000640038 FMN1Q68DA7 1419 aa13.81□□□□□ -0.2
PAX6-263ENST00000640038 CDC42BPAQ5VT25 1732 aa13.81□□□□□ -0.2
PAX6-263ENST00000640038 ATP7AQ04656 1500 aa13.8□□□□□ -0.2
PAX6-263ENST00000640038 SRCAPQ6ZRS2 3230 aa13.8□□□□□ -0.2
PAX6-263ENST00000640038 SYCP2Q9BX26 1530 aa13.8□□□□□ -0.2
PAX6-263ENST00000640038 SYNMO15061 1565 aa13.79□□□□□ -0.2
PAX6-263ENST00000640038 LRRIQ1Q96JM4 1722 aa13.79□□□□□ -0.2
PAX6-263ENST00000640038 MED14O60244 1454 aa13.79□□□□□ -0.2
PAX6-263ENST00000640038 FAM135AQ9P2D6 1515 aa13.79□□□□□ -0.2
PAX6-263ENST00000640038 DEPDC5O75140 1603 aa13.79□□□□□ -0.2
PAX6-263ENST00000640038 PLXNC1O60486 1568 aa13.78□□□□□ -0.2
PAX6-263ENST00000640038 UGGT1Q9NYU2 1555 aa13.78□□□□□ -0.2
PAX6-263ENST00000640038 NEFLP07196 543 aa13.76□□□□□ -0.21
PAX6-263ENST00000640038 FAM135BQ49AJ0 1406 aa13.75□□□□□ -0.21
PAX6-263ENST00000640038 MEX3CQ5U5Q3 659 aaKnown RBP13.75□□□□□ -0.21
PAX6-263ENST00000640038 UBE2Q2Q8WVN8 375 aa13.75□□□□□ -0.21
PAX6-263ENST00000640038 XIRP1Q702N8 1843 aaKnown RBP13.75□□□□□ -0.21
PAX6-263ENST00000640038 WASHC2CQ9Y4E1 1318 aa13.74□□□□□ -0.21
PAX6-263ENST00000640038 UBTFP17480 764 aaKnown RBP13.74□□□□□ -0.21
PAX6-263ENST00000640038 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
PAX6-263ENST00000640038 ADGBQ8N7X0 1667 aa13.73□□□□□ -0.21
PAX6-263ENST00000640038 KIF3BO15066 747 aa13.73□□□□□ -0.21
PAX6-263ENST00000640038 INO80Q9ULG1 1556 aaPredicted RBP13.73□□□□□ -0.21
PAX6-263ENST00000640038 ROBO1Q9Y6N7 1651 aa13.72□□□□□ -0.21
PAX6-263ENST00000640038 PZPP20742 1482 aa13.72□□□□□ -0.21
PAX6-263ENST00000640038 NLRP1Q9C000 1473 aa13.72□□□□□ -0.21
PAX6-263ENST00000640038 ZNF772Q68DY9 489 aaPredicted RBP13.71□□□□□ -0.21
PAX6-263ENST00000640038 CFAP65Q6ZU64 1925 aaKnown RBP13.7□□□□□ -0.22
PAX6-263ENST00000640038 DEKP35659 375 aaKnown RBP13.7□□□□□ -0.22
PAX6-263ENST00000640038 CFDP1Q9UEE9 299 aaPredicted RBP13.7□□□□□ -0.22
PAX6-263ENST00000640038 RXRBP28702 533 aa13.69□□□□□ -0.22
PAX6-263ENST00000640038 RBM33Q96EV2 1170 aaKnown RBP13.69□□□□□ -0.22
PAX6-263ENST00000640038 ARHGAP35Q9NRY4 1499 aa13.68□□□□□ -0.22
PAX6-263ENST00000640038 PHLPP1O60346 1717 aa13.68□□□□□ -0.22
PAX6-263ENST00000640038 ZC3H13Q5T200 1668 aaKnown RBP13.68□□□□□ -0.22
PAX6-263ENST00000640038 JCADQ9P266 1359 aa13.68□□□□□ -0.22
PAX6-263ENST00000640038 FKBP8Q14318 412 aa13.67□□□□□ -0.22
PAX6-263ENST00000640038 KDM5DQ9BY66 1539 aa13.67□□□□□ -0.22
PAX6-263ENST00000640038 GPATCH8Q9UKJ3 1502 aaKnown RBP13.66□□□□□ -0.22
PAX6-263ENST00000640038 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
PAX6-263ENST00000640038 DHX29Q7Z478 1369 aaKnown RBP13.66□□□□□ -0.22
PAX6-263ENST00000640038 PLEKHH2Q8IVE3 1493 aa13.66□□□□□ -0.22
PAX6-263ENST00000640038 KIAA1107Q9UPP5 1409 aa13.65□□□□□ -0.22
PAX6-263ENST00000640038 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
PAX6-263ENST00000640038 TMEM94Q12767 1356 aa13.65□□□□□ -0.22
PAX6-263ENST00000640038 LTKP29376 864 aa13.64□□□□□ -0.23
PAX6-263ENST00000640038 CCDC18Q5T9S5 1454 aa13.63□□□□□ -0.23
PAX6-263ENST00000640038 SCAF11Q99590 1463 aaKnown RBP13.63□□□□□ -0.23
PAX6-263ENST00000640038 ZNF644Q9H582 1327 aaPredicted RBP13.62□□□□□ -0.23
PAX6-263ENST00000640038 CCNB3Q8WWL7 1395 aa13.61□□□□□ -0.23
PAX6-263ENST00000640038 NUTM2BA6NNL0 878 aaPredicted RBP13.61□□□□□ -0.23
PAX6-263ENST00000640038 NUTM2EB1AL46 878 aaPredicted RBP13.61□□□□□ -0.23
PAX6-263ENST00000640038 NUTM2DQ5VT03 806 aaPredicted RBP13.61□□□□□ -0.23
PAX6-263ENST00000640038 NUTM2AQ8IVF1 878 aaPredicted RBP13.61□□□□□ -0.23
PAX6-263ENST00000640038 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
PAX6-263ENST00000640038 SLAIN2Q9P270 581 aa13.61□□□□□ -0.23
PAX6-263ENST00000640038 EID1Q9Y6B2 187 aa13.61□□□□□ -0.23
PAX6-263ENST00000640038 LRP6O75581 1613 aa13.61□□□□□ -0.23
PAX6-263ENST00000640038 DHX57Q6P158 1386 aaKnown RBP13.6□□□□□ -0.23
PAX6-263ENST00000640038 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
PAX6-263ENST00000640038 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
PAX6-263ENST00000640038 LRRC9Q6ZRR7 1453 aa13.59□□□□□ -0.23
PAX6-263ENST00000640038 SPATA31A6Q5VVP1 1343 aa13.59□□□□□ -0.23
PAX6-263ENST00000640038 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
PAX6-263ENST00000640038 CCER2I3L3R5 266 aa13.58□□□□□ -0.24
PAX6-263ENST00000640038 CASKIN1Q8WXD9 1431 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms