RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	PLEKHH2	Q8IVE3	1493 aa		10.29	□□□□□ -0.76
HNRNPU-223	ENST00000640001	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.29	□□□□□ -0.76
HNRNPU-223	ENST00000640001	ESF1	Q9H501	851 aa	Known RBP	10.29	□□□□□ -0.76
HNRNPU-223	ENST00000640001	NUDC	Q9Y266	331 aa		10.29	□□□□□ -0.76
HNRNPU-223	ENST00000640001	GCC2	Q8IWJ2	1684 aa		10.29	□□□□□ -0.76
HNRNPU-223	ENST00000640001	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.28	□□□□□ -0.76
HNRNPU-223	ENST00000640001	PLPPR3	Q6T4P5	718 aa		10.28	□□□□□ -0.76
HNRNPU-223	ENST00000640001	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
HNRNPU-223	ENST00000640001	NPM2	Q86SE8	214 aa	Known RBP	10.28	□□□□□ -0.76
HNRNPU-223	ENST00000640001	RBM19	Q9Y4C8	960 aa	Known RBP	10.28	□□□□□ -0.76
HNRNPU-223	ENST00000640001	WASHC2C	Q9Y4E1	1318 aa		10.27	□□□□□ -0.77
HNRNPU-223	ENST00000640001	SCAPER	Q9BY12	1400 aa		10.27	□□□□□ -0.77
HNRNPU-223	ENST00000640001	SYCP2	Q9BX26	1530 aa		10.26	□□□□□ -0.77
HNRNPU-223	ENST00000640001	TEX14	Q8IWB6	1497 aa		10.25	□□□□□ -0.77
HNRNPU-223	ENST00000640001	MLEC	Q14165	292 aa		10.25	□□□□□ -0.77
HNRNPU-223	ENST00000640001	NEUROD2	Q15784	382 aa		10.24	□□□□□ -0.77
HNRNPU-223	ENST00000640001	CYB5RL	Q6IPT4	315 aa		10.24	□□□□□ -0.77
HNRNPU-223	ENST00000640001	DAXX	Q9UER7	740 aa	Predicted RBP	10.24	□□□□□ -0.77
HNRNPU-223	ENST00000640001	TRAK1	Q9UPV9	953 aa		10.24	□□□□□ -0.77
HNRNPU-223	ENST00000640001	ADGRL2	O95490	1459 aa		10.24	□□□□□ -0.77
HNRNPU-223	ENST00000640001	STK26	Q9P289	416 aa		10.24	□□□□□ -0.77
HNRNPU-223	ENST00000640001	ANP32A	P39687	249 aa	Known RBP	10.24	□□□□□ -0.77
HNRNPU-223	ENST00000640001	ABCA8	O94911	1581 aa		10.23	□□□□□ -0.77
HNRNPU-223	ENST00000640001	DENND4B	O75064	1496 aa	Predicted RBP	10.23	□□□□□ -0.77
HNRNPU-223	ENST00000640001	ABCC10	Q5T3U5	1492 aa		10.23	□□□□□ -0.77
HNRNPU-223	ENST00000640001	ERICH6B	Q5W0A0	696 aa		10.23	□□□□□ -0.77
HNRNPU-223	ENST00000640001	RCAN3	Q9UKA8	241 aa		10.23	□□□□□ -0.77
HNRNPU-223	ENST00000640001	EIF3A	Q14152	1382 aa	Known RBP	10.22	□□□□□ -0.77
HNRNPU-223	ENST00000640001	SHANK2	Q9UPX8	1470 aa		10.22	□□□□□ -0.77
HNRNPU-223	ENST00000640001	CFAP70	Q5T0N1	1121 aa		10.22	□□□□□ -0.77
HNRNPU-223	ENST00000640001	PNISR	Q8TF01	805 aa	Known RBP	10.22	□□□□□ -0.77
HNRNPU-223	ENST00000640001	POGK	Q9P215	609 aa		10.21	□□□□□ -0.78
HNRNPU-223	ENST00000640001	PLCH2	O75038	1416 aa		10.21	□□□□□ -0.78
HNRNPU-223	ENST00000640001	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.21	□□□□□ -0.78
HNRNPU-223	ENST00000640001	FAM135A	Q9P2D6	1515 aa		10.21	□□□□□ -0.78
HNRNPU-223	ENST00000640001	TRAPPC8	Q9Y2L5	1435 aa		10.2	□□□□□ -0.78
HNRNPU-223	ENST00000640001	SLC24A1	O60721	1099 aa		10.2	□□□□□ -0.78
HNRNPU-223	ENST00000640001	MORC1	Q86VD1	984 aa		10.2	□□□□□ -0.78
HNRNPU-223	ENST00000640001	CCDC146	Q8IYE0	955 aa		10.2	□□□□□ -0.78
HNRNPU-223	ENST00000640001	ABCC2	Q92887	1545 aa		10.19	□□□□□ -0.78
HNRNPU-223	ENST00000640001	BRD4	O60885	1362 aa	Predicted RBP	10.19	□□□□□ -0.78
HNRNPU-223	ENST00000640001	SRPK2	P78362	688 aa	Known RBP	10.19	□□□□□ -0.78
HNRNPU-223	ENST00000640001	RALGAPB	Q86X10	1494 aa		10.19	□□□□□ -0.78
HNRNPU-223	ENST00000640001	RAPGEF3	O95398	923 aa		10.18	□□□□□ -0.78
HNRNPU-223	ENST00000640001	NEFM	P07197	916 aa		10.18	□□□□□ -0.78
HNRNPU-223	ENST00000640001	MBD5	Q9P267	1494 aa		10.18	□□□□□ -0.78
HNRNPU-223	ENST00000640001	ERBIN	Q96RT1	1412 aa		10.18	□□□□□ -0.78
HNRNPU-223	ENST00000640001	CFAP53	Q96M91	514 aa		10.18	□□□□□ -0.78
HNRNPU-223	ENST00000640001	TMEM132E	Q6IEE7	984 aa		10.17	□□□□□ -0.78
HNRNPU-223	ENST00000640001	FANCA	O15360	1455 aa		10.17	□□□□□ -0.78
HNRNPU-223	ENST00000640001	ADGRL1	O94910	1474 aa		10.17	□□□□□ -0.78
HNRNPU-223	ENST00000640001	ADGB	Q8N7X0	1667 aa		10.16	□□□□□ -0.78
HNRNPU-223	ENST00000640001	PPM1G	O15355	546 aa	Predicted RBP	10.16	□□□□□ -0.78
HNRNPU-223	ENST00000640001	PLIN1	O60240	522 aa		10.16	□□□□□ -0.78
HNRNPU-223	ENST00000640001	RTL5	Q5HYW3	569 aa	Predicted RBP	10.16	□□□□□ -0.78
HNRNPU-223	ENST00000640001	ANP32E	Q9BTT0	268 aa		10.16	□□□□□ -0.78
HNRNPU-223	ENST00000640001	ERCC6L2	Q5T890	1561 aa		10.15	□□□□□ -0.78
HNRNPU-223	ENST00000640001	PDE3B	Q13370	1112 aa		10.15	□□□□□ -0.78
HNRNPU-223	ENST00000640001	CDCA7L	Q96GN5	454 aa		10.15	□□□□□ -0.78
HNRNPU-223	ENST00000640001	SPATA31E1	Q6ZUB1	1445 aa		10.15	□□□□□ -0.78
HNRNPU-223	ENST00000640001	PRAG1	Q86YV5	1406 aa		10.15	□□□□□ -0.78
HNRNPU-223	ENST00000640001	STAC3	Q96MF2	364 aa		10.15	□□□□□ -0.78
HNRNPU-223	ENST00000640001	DUOX2	Q9NRD8	1548 aa		10.15	□□□□□ -0.78
HNRNPU-223	ENST00000640001	DISP3	Q9P2K9	1392 aa		10.15	□□□□□ -0.79
HNRNPU-223	ENST00000640001	KDM5B	Q9UGL1	1544 aa		10.15	□□□□□ -0.79
HNRNPU-223	ENST00000640001	U2SURP	O15042	1029 aa	Known RBP	10.14	□□□□□ -0.79
HNRNPU-223	ENST00000640001	EXOC6	Q8TAG9	804 aa		10.14	□□□□□ -0.79
HNRNPU-223	ENST00000640001	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
HNRNPU-223	ENST00000640001	CHD1	O14646	1710 aa		10.14	□□□□□ -0.79
HNRNPU-223	ENST00000640001	RRP1	P56182	461 aa	Known RBP	10.14	□□□□□ -0.79
HNRNPU-223	ENST00000640001	ADAMTS8	Q9UP79	889 aa		10.14	□□□□□ -0.79
HNRNPU-223	ENST00000640001	SAMD9L	Q8IVG5	1584 aa		10.14	□□□□□ -0.79
HNRNPU-223	ENST00000640001	BCL11A	Q9H165	835 aa		10.14	□□□□□ -0.79
HNRNPU-223	ENST00000640001	DHX29	Q7Z478	1369 aa	Known RBP	10.14	□□□□□ -0.79
HNRNPU-223	ENST00000640001	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.13	□□□□□ -0.79
HNRNPU-223	ENST00000640001	GOLGA2	Q08379	1002 aa		10.13	□□□□□ -0.79
HNRNPU-223	ENST00000640001	FAM69C	Q0P6D2	419 aa		10.13	□□□□□ -0.79
HNRNPU-223	ENST00000640001	UHRF1BP1	Q6BDS2	1440 aa		10.13	□□□□□ -0.79
HNRNPU-223	ENST00000640001	PPP2R1A	P30153	589 aa		10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	FRAT1	Q92837	279 aa	Predicted RBP	10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	CD109	Q6YHK3	1445 aa		10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	ASXL2	Q76L83	1435 aa		10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	ARHGEF12	Q9NZN5	1544 aa		10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	CDC42BPA	Q5VT25	1732 aa		10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	VGF	O15240	615 aa	Predicted RBP	10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	ARHGEF5	Q12774	1597 aa		10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	TTC37	Q6PGP7	1564 aa		10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	WDR7	Q9Y4E6	1490 aa		10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	NBR1	Q14596	966 aa		10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	ADGRF5	Q8IZF2	1346 aa		10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	APAF1	O14727	1248 aa		10.12	□□□□□ -0.79
HNRNPU-223	ENST00000640001	ADCY10	Q96PN6	1610 aa		10.11	□□□□□ -0.79
HNRNPU-223	ENST00000640001	SMG6	Q86US8	1419 aa	Known RBP	10.11	□□□□□ -0.79
HNRNPU-223	ENST00000640001	RRP7A	Q9Y3A4	280 aa	Known RBP	10.11	□□□□□ -0.79
HNRNPU-223	ENST00000640001	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.1	□□□□□ -0.79
HNRNPU-223	ENST00000640001	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.1	□□□□□ -0.79	2e-8	■■■□□ 17.8
HNRNPU-223	ENST00000640001	TESK2	Q96S53	571 aa		10.1	□□□□□ -0.79
HNRNPU-223	ENST00000640001	A2M	P01023	1474 aa		10.1	□□□□□ -0.79
HNRNPU-223	ENST00000640001	RGS3	P49796	1198 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms