RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
NECAP1-220ENST00000639841 TDRD9Q8NDG6 1382 aaKnown RBP11.23□□□□□ -0.61
NECAP1-220ENST00000639841 GPR37O15354 613 aa11.23□□□□□ -0.61
NECAP1-220ENST00000639841 CUX1P39880 1505 aa11.22□□□□□ -0.61
NECAP1-220ENST00000639841 GAPVD1Q14C86 1478 aa11.21□□□□□ -0.61
NECAP1-220ENST00000639841 ABCA10Q8WWZ4 1543 aa11.21□□□□□ -0.61
NECAP1-220ENST00000639841 ABCA5Q8WWZ7 1642 aa11.2□□□□□ -0.62
NECAP1-220ENST00000639841 AMHR2Q16671 573 aa11.18□□□□□ -0.62
NECAP1-220ENST00000639841 FAM177A1Q8N128 213 aaPredicted RBP11.18□□□□□ -0.62
NECAP1-220ENST00000639841 MFSD10Q14728 455 aa11.17□□□□□ -0.62
NECAP1-220ENST00000639841 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
NECAP1-220ENST00000639841 MNX1P50219 401 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-220ENST00000639841 AMOTL2Q9Y2J4 779 aa11.16□□□□□ -0.62
NECAP1-220ENST00000639841 RSPH4AQ5TD94 716 aa11.16□□□□□ -0.62
NECAP1-220ENST00000639841 CCDC102AQ96A19 550 aa11.15□□□□□ -0.62
NECAP1-220ENST00000639841 GRIN2AQ12879 1464 aa11.14□□□□□ -0.63
NECAP1-220ENST00000639841 CAMK2BQ13554 666 aa11.14□□□□□ -0.63
NECAP1-220ENST00000639841 ADAMTS12P58397 1594 aa11.14□□□□□ -0.63
NECAP1-220ENST00000639841 SHROOM2Q13796 1616 aa11.13□□□□□ -0.63
NECAP1-220ENST00000639841 NUP160Q12769 1436 aa11.13□□□□□ -0.63
NECAP1-220ENST00000639841 PCMTD1Q96MG8 357 aaPredicted RBP11.13□□□□□ -0.63
NECAP1-220ENST00000639841 WRNQ14191 1432 aaPredicted RBP eCLIP11.12□□□□□ -0.63
NECAP1-220ENST00000639841 MINK1Q8N4C8 1332 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-220ENST00000639841 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
NECAP1-220ENST00000639841 ERICH3Q5RHP9 1530 aa11.11□□□□□ -0.63
NECAP1-220ENST00000639841 FHAD1B1AJZ9 1412 aa11.11□□□□□ -0.63
NECAP1-220ENST00000639841 CEP170Q5SW79 1584 aa11.1□□□□□ -0.63
NECAP1-220ENST00000639841 BIVM-ERCC5R4GMW8 1640 aa11.1□□□□□ -0.63
NECAP1-220ENST00000639841 UNCXA6NJT0 531 aa11.08□□□□□ -0.64
NECAP1-220ENST00000639841 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
NECAP1-220ENST00000639841 IGSF5Q9NSI5 407 aa11.08□□□□□ -0.64
NECAP1-220ENST00000639841 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
NECAP1-220ENST00000639841 CRISPLD2Q9H0B8 497 aa11.07□□□□□ -0.64
NECAP1-220ENST00000639841 HAX1O00165 279 aa11.07□□□□□ -0.64
NECAP1-220ENST00000639841 IRF6O14896 467 aa11.07□□□□□ -0.64
NECAP1-220ENST00000639841 KCNA1Q09470 495 aa11.07□□□□□ -0.64
NECAP1-220ENST00000639841 MAP2K5Q13163 448 aa11.07□□□□□ -0.64
NECAP1-220ENST00000639841 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
NECAP1-220ENST00000639841 PATL2C9JE40 543 aaKnown RBP11.06□□□□□ -0.64
NECAP1-220ENST00000639841 DDX27Q96GQ7 796 aaKnown RBP11.06□□□□□ -0.64
NECAP1-220ENST00000639841 MS4A1P11836 297 aa11.05□□□□□ -0.64
NECAP1-220ENST00000639841 PDE4AP27815 886 aa11.05□□□□□ -0.64
NECAP1-220ENST00000639841 PDAP1Q13442 181 aaKnown RBP11.05□□□□□ -0.64
NECAP1-220ENST00000639841 BRD1O95696 1058 aa11.03□□□□□ -0.64
NECAP1-220ENST00000639841 CCDC27Q2M243 656 aa11.03□□□□□ -0.64
NECAP1-220ENST00000639841 OXER1Q8TDS5 423 aa11.03□□□□□ -0.64
NECAP1-220ENST00000639841 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
NECAP1-220ENST00000639841 MAPKBP1O60336 1514 aa11.02□□□□□ -0.65
NECAP1-220ENST00000639841 DHX37Q8IY37 1157 aaKnown RBP11.02□□□□□ -0.65
NECAP1-220ENST00000639841 KIF13AQ9H1H9 1805 aa11.02□□□□□ -0.65
NECAP1-220ENST00000639841 SH3D19Q5HYK7 790 aa11.01□□□□□ -0.65
NECAP1-220ENST00000639841 LHX8Q68G74 356 aa11.01□□□□□ -0.65
NECAP1-220ENST00000639841 ZNF330Q9Y3S2 320 aaPredicted RBP11.01□□□□□ -0.65
NECAP1-220ENST00000639841 ZNF467Q7Z7K2 595 aaPredicted RBP11□□□□□ -0.65
NECAP1-220ENST00000639841 PDE4CQ08493 712 aa10.99□□□□□ -0.65
NECAP1-220ENST00000639841 CCDC125Q86Z20 511 aa10.99□□□□□ -0.65
NECAP1-220ENST00000639841 ERCC6L2Q5T890 1561 aa10.99□□□□□ -0.65
NECAP1-220ENST00000639841 ACIN1Q9UKV3 1341 aaKnown RBP10.98□□□□□ -0.65
NECAP1-220ENST00000639841 TTLL12Q14166 644 aaPredicted RBP10.98□□□□□ -0.65
NECAP1-220ENST00000639841 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
NECAP1-220ENST00000639841 ABCC10Q5T3U5 1492 aa10.98□□□□□ -0.65
NECAP1-220ENST00000639841 GIGYF2Q6Y7W6 1299 aaKnown RBP10.97□□□□□ -0.65
NECAP1-220ENST00000639841 PRG4Q92954 1404 aaPredicted RBP10.97□□□□□ -0.65
NECAP1-220ENST00000639841 RUSC2Q8N2Y8 1516 aa10.97□□□□□ -0.65
NECAP1-220ENST00000639841 NLRP6P59044 892 aa10.96□□□□□ -0.65
NECAP1-220ENST00000639841 REPIN1Q9BWE0 567 aaKnown RBP10.96□□□□□ -0.65
NECAP1-220ENST00000639841 SND1Q7KZF4 910 aaKnown RBP eCLIP10.96□□□□□ -0.66
NECAP1-220ENST00000639841 PCDHB8Q9UN66 801 aa10.96□□□□□ -0.66
NECAP1-220ENST00000639841 PCDHB13Q9Y5F0 798 aa10.96□□□□□ -0.66
NECAP1-220ENST00000639841 CUL7Q14999 1698 aa10.94□□□□□ -0.66
NECAP1-220ENST00000639841 FECHP22830 423 aa10.94□□□□□ -0.66
NECAP1-220ENST00000639841 IVNS1ABPQ9Y6Y0 642 aa10.94□□□□□ -0.66
NECAP1-220ENST00000639841 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
NECAP1-220ENST00000639841 CARNS1A5YM72 827 aa10.94□□□□□ -0.66
NECAP1-220ENST00000639841 SPDYE5A6NIY4 337 aa10.94□□□□□ -0.66
NECAP1-220ENST00000639841 EFCAB3Q8N7B9 438 aa10.94□□□□□ -0.66
NECAP1-220ENST00000639841 PSEN1P49768 467 aa10.92□□□□□ -0.66
NECAP1-220ENST00000639841 JPH4Q96JJ6 628 aa10.92□□□□□ -0.66
NECAP1-220ENST00000639841 PROCA1Q8NCQ7 364 aaPredicted RBP10.92□□□□□ -0.66
NECAP1-220ENST00000639841 KIAA0586Q9BVV6 1533 aa10.91□□□□□ -0.66
NECAP1-220ENST00000639841 KDM6BO15054 1643 aa10.91□□□□□ -0.66
NECAP1-220ENST00000639841 PDIA6Q15084 440 aa10.91□□□□□ -0.66
NECAP1-220ENST00000639841 USTQ9Y2C2 406 aa10.91□□□□□ -0.66
NECAP1-220ENST00000639841 DPYSL4O14531 572 aa10.9□□□□□ -0.66
NECAP1-220ENST00000639841 PPM1GO15355 546 aaPredicted RBP10.9□□□□□ -0.66
NECAP1-220ENST00000639841 SNRKQ9NRH2 765 aa10.9□□□□□ -0.66
NECAP1-220ENST00000639841 SKIV2LQ15477 1246 aaKnown RBP10.9□□□□□ -0.66
NECAP1-220ENST00000639841 PIP4P2Q8N4L2 257 aa10.9□□□□□ -0.66
NECAP1-220ENST00000639841 MYT1LQ9UL68 1186 aa10.9□□□□□ -0.66
NECAP1-220ENST00000639841 POLR3GLQ9BT43 218 aa10.89□□□□□ -0.67
NECAP1-220ENST00000639841 ADCY10Q96PN6 1610 aa10.89□□□□□ -0.67
NECAP1-220ENST00000639841 GNPATO15228 680 aa10.88□□□□□ -0.67
NECAP1-220ENST00000639841 CALR3Q96L12 384 aaKnown RBP10.88□□□□□ -0.67
NECAP1-220ENST00000639841 RBM47A0AV96 593 aaKnown RBP10.88□□□□□ -0.67
NECAP1-220ENST00000639841 BRD2P25440 801 aaKnown RBP10.88□□□□□ -0.67
NECAP1-220ENST00000639841 KIAA1522Q9P206 1035 aaPredicted RBP10.88□□□□□ -0.67
NECAP1-220ENST00000639841 FAM69CQ0P6D2 419 aa10.87□□□□□ -0.67
NECAP1-220ENST00000639841 PBXIP1Q96AQ6 731 aa10.87□□□□□ -0.67
NECAP1-220ENST00000639841 SOX12O15370 315 aa10.86□□□□□ -0.67
NECAP1-220ENST00000639841 EMILIN3Q9NT22 766 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms